Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | ABYM97_RS00675 | Genome accession | NZ_CP159874 |
| Coordinates | 115284..115574 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain PY79 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 110284..120574
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABYM97_RS00660 (ABYM97_00660) | yabE | 110480..111793 (-) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
| ABYM97_RS00665 (ABYM97_00665) | dayD | 111949..112716 (-) | 768 | WP_003226756.1 | TatD family hydrolase | - |
| ABYM97_RS00670 (ABYM97_00670) | metG | 112795..114789 (-) | 1995 | WP_003226758.1 | methionine--tRNA ligase | - |
| ABYM97_RS00675 (ABYM97_00675) | abrB | 115284..115574 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| ABYM97_RS00680 (ABYM97_00680) | rsmI | 115623..116501 (-) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| ABYM97_RS00685 (ABYM97_00685) | yazA | 116476..116775 (-) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| ABYM97_RS00690 (ABYM97_00690) | trmNF | 116762..117505 (-) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| ABYM97_RS00695 (ABYM97_00695) | yabA | 117564..117923 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| ABYM97_RS00700 (ABYM97_00700) | ricT | 117938..118765 (-) | 828 | WP_003243571.1 | competence/sporulation regulator complex protein RicT | - |
| ABYM97_RS00705 (ABYM97_00705) | holB | 118768..119757 (-) | 990 | WP_003244417.1 | DNA polymerase III subunit delta' | - |
| ABYM97_RS00710 (ABYM97_00710) | yaaR | 119769..120209 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| ABYM97_RS00715 (ABYM97_00715) | darA | 120222..120551 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=1016328 ABYM97_RS00675 WP_003226760.1 115284..115574(+) (abrB) [Bacillus subtilis strain PY79]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=1016328 ABYM97_RS00675 WP_003226760.1 115284..115574(+) (abrB) [Bacillus subtilis strain PY79]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |