Detailed information NTG1014623

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABV836_RS01440
• Genome accession: NZ_CP159579
• Coordinates: 307554..308612 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain Ab6-Co-2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 302554..313612

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABV836_RS01425 (ABV836_01425)	-	303659..303991 (+)	333	WP_000169594.1	hypothetical protein	-
ABV836_RS01430 (ABV836_01430)	-	303994..304818 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
ABV836_RS01435 (ABV836_01435)	ponA	304836..307391 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
ABV836_RS01440 (ABV836_01440)	pilM	307554..308612 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
ABV836_RS01445 (ABV836_01445)	pilN	308612..309253 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
ABV836_RS01450 (ABV836_01450)	pilO	309250..309990 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABV836_RS01455 (ABV836_01455)	pilP	310001..310528 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
ABV836_RS01460 (ABV836_01460)	pilQ	310596..312761 (+)	2166	WP_001017033.1	type IV pilus secretin PilQ family protein	Machinery gene
ABV836_RS01465 (ABV836_01465)	aroK	312773..313342 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=1014623 ABV836_RS01440 WP_002014066.1 307554..308612(+) (pilM) [Acinetobacter baumannii strain Ab6-Co-2]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1014623 ABV836_RS01440 WP_002014066.1 307554..308612(+) (pilM) [Acinetobacter baumannii strain Ab6-Co-2]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423