Detailed information NTG1013926

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABNK30_RS04330
• Genome accession: NZ_CP159509
• Coordinates: 959630..961003 (-)
• Length: 457 a.a.
• NCBI ID: WP_111108606.1
• Uniprot ID: -
• Organism: Stenotrophomonas maltophilia strain SM911
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 954630..966003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNK30_RS04310	pilC	954969..956228 (-)	1260	WP_049403032.1	type II secretion system F family protein	Machinery gene
ABNK30_RS04315	-	956581..957003 (+)	423	WP_049403031.1	pilin	-
ABNK30_RS04320	-	957114..957563 (+)	450	WP_275043866.1	pilin	-
ABNK30_RS04325	pilB	957786..959519 (+)	1734	WP_049403029.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ABNK30_RS04330	pilR	959630..961003 (-)	1374	WP_111108606.1	sigma-54 dependent transcriptional regulator	Regulator
ABNK30_RS04335	-	961064..962677 (-)	1614	WP_005414304.1	ATP-binding protein	-
ABNK30_RS04340	sucC	963035..964204 (+)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
ABNK30_RS04345	sucD	964226..965101 (+)	876	WP_005410793.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49545.79 Da
• Isoelectric Point: 6.4407

>NTDB_id=1013926 ABNK30_RS04330 WP_111108606.1 959630..961003(-) (pilR) [Stenotrophomonas maltophilia strain SM911]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNAERPAPGPNAEQGGRLLGHSQAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRATPLLAPSALEALAQYAFPGNVRELENILERALALAEEDCIGADDLRLPQHAPRTPGSAAPAEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=1013926 ABNK30_RS04330 WP_111108606.1 959630..961003(-) (pilR) [Stenotrophomonas maltophilia strain SM911]
ATGAATGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTGCTGACCCTCGGCCGCAT
GGGGCTGCGCATCAGTACCGCCGCCAACCTGGCCGAGGCACGTGAGCTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCCGATGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACGCCGGTGGCG
ATGATCACCGCATTCGGCAGCATGGATCTCGCCGTGGAGGCACTGAAGGCCGGTGCGTTCGATTTCGTCAGCAAGCCGGT
GGACATCTCGGTGCTGCGCGGACTGGTCAAGCACGCGCTGGAACTCAACAACGCCGAGCGCCCCGCACCGGGCCCCAACG
CCGAACAGGGCGGGCGCCTGCTGGGCCACTCGCAGGCCATGGATGTGCTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGCGAGTCGGGCGTCGGCAAGGAGCTGGTTGCACGCACCATCCATGCCCAGGGTGCACG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAGAGCGAATTCTTCGGCCACCGCA
AGGGCAGTTTCAGCGGCGCGCACGCTGACAAGCCTGGCCTGTTCCAGGCTGCGCACGGCGGCACCCTGTTCCTGGACGAA
GTGGCTGAACTGCCACTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAGTCGGTGCGCGCGGTGGGTGCGGC
CAACGAGGAGCCAGTGGATGTCCGCATCCTCTCGGCCACCCACAAGGATCTGGCCGAGCTGGTCGAGGACGGCCGCTTCC
GCCACGACCTGTACTACCGCATCAACGTGATCGAACTGAAGGTGCCGCCGCTGCGCGAGCGCCGCCAGGACCTGCCCGAA
CTGGCCGCCGCCGTGCTGGCCCGCCTGGCCCGCAGCCACGGCCGCGCCACCCCGCTGCTGGCGCCCTCGGCGCTGGAAGC
ACTGGCGCAGTACGCGTTCCCGGGCAATGTGCGCGAGCTGGAGAACATCCTGGAACGTGCGCTGGCCCTGGCCGAGGAAG
ACTGCATCGGCGCCGATGACCTGCGCCTGCCGCAGCACGCGCCGCGTACGCCGGGCAGTGCCGCGCCCGCCGAAGCGGTG
GCCGACCTGCAGCCGGGCAGCGCCGCACTGCCCTCCTACATCGAGCAGCTCGAGCGCAGCGCCATCCAGCGTGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGCACCGCCGCGCAGCTGGGCATCACCTTCCGTGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAG

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Response regulator receiver domain (Response_reg) (8-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.555	99.344	0.621
pilR	Acinetobacter baumannii strain A118	47.948	100	0.486