Detailed information
Bioinformatically predicted
Overview
| Name | comGG | Type | Machinery gene |
| Locus tag | ABVR74_RS00795 | Genome accession | NZ_CP159484 |
| Coordinates | 165942..166226 (+) | Length | 94 a.a. |
| NCBI ID | WP_025017139.1 | Uniprot ID | - |
| Organism | Lactococcus lactis subsp. lactis strain CBA3648 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 160942..171226
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABVR74_RS00765 (ABVR74_00765) | comGA | 162534..163472 (+) | 939 | WP_353891726.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABVR74_RS00770 (ABVR74_00770) | comGB | 163420..164439 (+) | 1020 | WP_058223571.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ABVR74_RS00775 (ABVR74_00775) | comGC | 164566..164835 (+) | 270 | WP_023188581.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABVR74_RS00780 (ABVR74_00780) | comGD | 164810..165226 (+) | 417 | WP_025017137.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ABVR74_RS00785 (ABVR74_00785) | comGE | 165198..165494 (+) | 297 | WP_010906316.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ABVR74_RS00790 (ABVR74_00790) | comGF | 165457..165903 (+) | 447 | WP_029344525.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ABVR74_RS00795 (ABVR74_00795) | comGG | 165942..166226 (+) | 285 | WP_025017139.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ABVR74_RS00800 (ABVR74_00800) | - | 166308..166745 (+) | 438 | WP_003129992.1 | zinc-dependent MarR family transcriptional regulator | - |
| ABVR74_RS00805 (ABVR74_00805) | - | 166742..167584 (+) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| ABVR74_RS00810 (ABVR74_00810) | - | 167761..168498 (+) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| ABVR74_RS00815 (ABVR74_00815) | - | 168491..169300 (+) | 810 | WP_014570791.1 | metal ABC transporter permease | - |
| ABVR74_RS00820 (ABVR74_00820) | - | 169338..170204 (-) | 867 | WP_025017140.1 | RluA family pseudouridine synthase | - |
| ABVR74_RS00825 (ABVR74_00825) | - | 170409..170786 (+) | 378 | WP_003129983.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10813.05 Da Isoelectric Point: 5.0604
>NTDB_id=1013806 ABVR74_RS00795 WP_025017139.1 165942..166226(+) (comGG) [Lactococcus lactis subsp. lactis strain CBA3648]
MFSMFLQFYLERQIDDARQLRSEKEQLTAELMVSVALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDENTYQF
SIHLKDGTNFQIKK
MFSMFLQFYLERQIDDARQLRSEKEQLTAELMVSVALKTDLKSQGQIHFDSGDLSYNLLTDSSASSKITDHSSDENTYQF
SIHLKDGTNFQIKK
Nucleotide
Download Length: 285 bp
>NTDB_id=1013806 ABVR74_RS00795 WP_025017139.1 165942..166226(+) (comGG) [Lactococcus lactis subsp. lactis strain CBA3648]
ATGTTTTCAATGTTTCTTCAGTTCTATTTGGAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTT
AACAGCTGAATTAATGGTGTCAGTAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGGGATT
TGTCCTACAATTTACTGACAGACTCGTCAGCTAGTTCAAAAATTACTGACCATTCAAGTGATGAAAATACCTATCAATTT
AGTATCCATCTAAAAGATGGCACAAACTTTCAAATAAAAAAATAA
ATGTTTTCAATGTTTCTTCAGTTCTATTTGGAAAGGCAAATAGATGATGCTCGACAATTAAGAAGTGAAAAGGAGCAGTT
AACAGCTGAATTAATGGTGTCAGTAGCTTTAAAGACTGATTTAAAATCTCAAGGTCAAATTCATTTTGATTCAGGGGATT
TGTCCTACAATTTACTGACAGACTCGTCAGCTAGTTCAAAAATTACTGACCATTCAAGTGATGAAAATACCTATCAATTT
AGTATCCATCTAAAAGATGGCACAAACTTTCAAATAAAAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGG | Lactococcus lactis subsp. cremoris KW2 |
58.511 |
100 |
0.585 |