Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   ABWH88_RS13615 Genome accession   NZ_CP159479
Coordinates   2857129..2857521 (-) Length   130 a.a.
NCBI ID   WP_008175635.1    Uniprot ID   G6YWX8
Organism   Marinobacter adhaerens strain ac5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2852129..2862521
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABWH88_RS13595 (ABWH88_13565) - 2853074..2853973 (-) 900 WP_014578674.1 protein-glutamate O-methyltransferase CheR -
  ABWH88_RS13600 (ABWH88_13570) - 2854001..2856076 (-) 2076 WP_041645743.1 methyl-accepting chemotaxis protein -
  ABWH88_RS13605 (ABWH88_13575) - 2856168..2856713 (-) 546 WP_008172777.1 chemotaxis protein CheW -
  ABWH88_RS13610 (ABWH88_13580) pilH 2856734..2857096 (-) 363 WP_011787171.1 twitching motility response regulator PilH -
  ABWH88_RS13615 (ABWH88_13585) pilG 2857129..2857521 (-) 393 WP_008175635.1 twitching motility response regulator PilG Regulator
  ABWH88_RS13620 (ABWH88_13590) gshB 2857819..2858772 (+) 954 WP_014578672.1 glutathione synthase -
  ABWH88_RS13625 (ABWH88_13595) - 2858821..2859687 (+) 867 WP_014578671.1 energy transducer TonB -
  ABWH88_RS13630 (ABWH88_13600) - 2859684..2860250 (+) 567 WP_039882120.1 YqgE/AlgH family protein -
  ABWH88_RS13635 (ABWH88_13605) ruvX 2860243..2860665 (+) 423 WP_008175643.1 Holliday junction resolvase RuvX -
  ABWH88_RS13640 (ABWH88_13610) pyrR 2860673..2861182 (+) 510 WP_008175647.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABWH88_RS13645 (ABWH88_13615) - 2861210..2862223 (+) 1014 WP_008175649.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 130 a.a.        Molecular weight: 14595.86 Da        Isoelectric Point: 5.2241

>NTDB_id=1013757 ABWH88_RS13615 WP_008175635.1 2857129..2857521(-) (pilG) [Marinobacter adhaerens strain ac5]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=1013757 ABWH88_RS13615 WP_008175635.1 2857129..2857521(-) (pilG) [Marinobacter adhaerens strain ac5]
ATGGATGACAACTTCGAGAACTTGAAGATCATGGTGATCGACGACAGTAAAACCATACGTCGCACCGCAGAAACCCTTCT
GAAAAAGGTCGGCTGTGAGGTCATCACCGCGACTGACGGCTTTGACGCTCTTGCCAAGATTGCCGATTCACAGCCGGACA
TCATTTTTGTCGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTTATCAAGAACAATTCCTCCTTCAAA
AAGACGCCGGTTATCATGCTCTCCAGCAAGGACGGTCTGTTCGACAAGGCCAAGGGCCGTATCGTCGGCTCGGACCAGTA
TCTGACCAAACCGTTCAGTAAGGATGAGCTGCTTAATACCATCCGCCAGTATGTTCCACAGGCGGAACAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G6YWX8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754

  vicR Streptococcus mutans UA159

41.803

93.846

0.392

  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369

  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362


Multiple sequence alignment