Detailed information NTG1013749

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABWH88_RS07780
• Genome accession: NZ_CP159479
• Coordinates: 1631283..1632344 (-)
• Length: 353 a.a.
• NCBI ID: WP_219496222.1
• Uniprot ID: -
• Organism: Marinobacter adhaerens strain ac5
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1626283..1637344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABWH88_RS07755 (ABWH88_07755)	aroK	1626723..1627289 (-)	567	WP_008170790.1	shikimate kinase AroK	-
ABWH88_RS07760 (ABWH88_07760)	pilQ	1627426..1629492 (-)	2067	WP_014576031.1	type IV pilus secretin PilQ	Machinery gene
ABWH88_RS07765 (ABWH88_07765)	-	1629558..1630106 (-)	549	WP_041644945.1	pilus assembly protein PilP	-
ABWH88_RS07770 (ABWH88_07770)	-	1630109..1630720 (-)	612	WP_014576029.1	type 4a pilus biogenesis protein PilO	-
ABWH88_RS07775 (ABWH88_07775)	-	1630717..1631283 (-)	567	WP_014576028.1	PilN domain-containing protein	-
ABWH88_RS07780 (ABWH88_07780)	pilM	1631283..1632344 (-)	1062	WP_219496222.1	pilus assembly protein PilM	Machinery gene
ABWH88_RS07785 (ABWH88_07785)	-	1632540..1635068 (+)	2529	WP_041644944.1	penicillin-binding protein 1A	-
ABWH88_RS07790 (ABWH88_07790)	-	1635136..1636401 (-)	1266	WP_053114367.1	malic enzyme-like NAD(P)-binding protein	-
ABWH88_RS07795 (ABWH88_07795)	rpmE	1636653..1636874 (-)	222	WP_008170804.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 353 a.a.
• Molecular weight: 37780.85 Da
• Isoelectric Point: 4.1452

>NTDB_id=1013749 ABWH88_RS07780 WP_219496222.1 1631283..1632344(-) (pilM) [Marinobacter adhaerens strain ac5]
MFGLGKKSSAVLGVDISSSSVKLLELSKQGDRYKVESYAVEPLPANAVVEKNITDVEAVGEVMKRVASKSRSGVKQVAVA
VSGSAVITKLIQMDGGLNEFEMEDQIALEADQYIPYPLDEVAIDFEVQGPSESNPDQVDVLLAACRKENVDIREDALEIA
SLTTKVVDVEAYALERAYALIEPQLDSQGEELVVAIVDIGATMTTLSVLAGGKTVYTREQIFGGKQLTEEIQRRYGLSLE
EAGLAKKQGGLPDDYESEVLTPFREAVVQQVARALQFFFGASQYNAVDYVVLAGGTASIQGLTEMVEEKTGTPTMVANPF
ADMAVGSKVNASALSNDAPSLMIACGLAMRSFD

Nucleotide

• Length: 1062 bp

>NTDB_id=1013749 ABWH88_RS07780 WP_219496222.1 1631283..1632344(-) (pilM) [Marinobacter adhaerens strain ac5]
GTGTTTGGATTAGGAAAGAAATCCAGTGCAGTGCTGGGCGTGGATATAAGCTCCAGCTCGGTCAAACTTCTGGAGCTATC
GAAGCAGGGCGACCGTTATAAGGTCGAAAGCTACGCGGTGGAGCCTTTGCCGGCCAATGCCGTGGTGGAAAAGAACATTA
CGGACGTAGAAGCTGTGGGCGAGGTAATGAAGCGCGTAGCTTCCAAGTCCCGTTCTGGCGTCAAACAGGTTGCTGTTGCG
GTCTCAGGTTCTGCGGTTATTACCAAGCTTATCCAGATGGATGGCGGCCTGAACGAATTCGAGATGGAAGACCAGATTGC
CCTTGAGGCCGATCAATATATTCCATACCCGCTGGACGAAGTGGCCATCGATTTCGAAGTTCAGGGACCTTCCGAGAGTA
ACCCCGACCAGGTGGATGTGCTTCTGGCTGCTTGCCGGAAGGAAAATGTCGACATCCGCGAGGATGCACTCGAGATTGCC
TCGCTGACTACCAAGGTGGTTGACGTTGAAGCCTATGCCCTTGAGCGTGCCTATGCACTGATCGAGCCTCAGCTGGACTC
TCAGGGAGAAGAGCTGGTGGTAGCGATCGTGGACATTGGCGCGACCATGACCACGCTGAGTGTTCTGGCCGGTGGTAAGA
CCGTTTACACGCGAGAGCAGATTTTCGGTGGCAAACAGCTGACCGAGGAAATCCAGCGCCGATACGGTTTGTCGCTCGAG
GAAGCCGGTCTTGCGAAAAAGCAGGGCGGACTACCTGACGATTACGAGTCAGAAGTGCTTACGCCGTTCCGCGAGGCTGT
CGTGCAGCAGGTTGCCCGCGCGCTTCAGTTCTTCTTTGGTGCCAGTCAATACAATGCCGTCGATTACGTGGTTCTGGCCG
GGGGCACGGCCTCGATTCAGGGGCTCACTGAAATGGTCGAAGAAAAAACGGGAACGCCGACCATGGTCGCGAATCCTTTT
GCAGACATGGCGGTAGGTTCAAAGGTGAACGCGTCGGCACTGAGTAATGATGCGCCTTCCCTGATGATTGCCTGCGGCCT
GGCAATGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-352)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	54.023	98.584	0.533
comM	Acinetobacter nosocomialis M2	54.023	98.584	0.533
comM	Acinetobacter baylyi ADP1	51.724	98.584	0.51
pilM	Legionella pneumophila strain ERS1305867	46.571	99.15	0.462