Detailed information NTG1013395

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABVJ71_RS13265
• Genome accession: NZ_CP159358
• Coordinates: 2583226..2584401 (+)
• Length: 391 a.a.
• NCBI ID: WP_353854433.1
• Uniprot ID: -
• Organism: Bacillus sp. Bos-x628
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2578226..2589401

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABVJ71_RS13245	-	2578826..2580022 (+)	1197	WP_353854429.1	glycosyltransferase	-
ABVJ71_RS13250	-	2580159..2581226 (+)	1068	WP_353854430.1	MraY family glycosyltransferase	-
ABVJ71_RS13255	-	2581263..2582351 (-)	1089	WP_353854431.1	LCP family protein	-
ABVJ71_RS13260	-	2582336..2583004 (-)	669	WP_353854432.1	YigZ family protein	-
ABVJ71_RS13265	degS	2583226..2584401 (+)	1176	WP_353854433.1	sensor histidine kinase	Regulator
ABVJ71_RS13270	degU	2584466..2585155 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ABVJ71_RS13275	-	2585368..2586210 (+)	843	WP_353854434.1	DegV family protein	-
ABVJ71_RS13280	comFA	2586582..2587724 (+)	1143	WP_353854435.1	DEAD/DEAH box helicase family protein	Machinery gene
ABVJ71_RS13285	-	2587789..2588076 (+)	288	WP_353856671.1	late competence development ComFB family protein	-
ABVJ71_RS13290	comFC	2588309..2588743 (+)	435	WP_353854436.1	phosphoribosyltransferase family protein	Machinery gene
ABVJ71_RS13295	-	2588800..2589219 (+)	420	WP_353854437.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45539.21 Da
• Isoelectric Point: 5.6529

>NTDB_id=1013395 ABVJ71_RS13265 WP_353854433.1 2583226..2584401(+) (degS) [Bacillus sp. Bos-x628]
MTTAKMDPKLLDSIIMKMLSTVDDSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEDEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIPSQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFATLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1013395 ABVJ71_RS13265 WP_353854433.1 2583226..2584401(+) (degS) [Bacillus sp. Bos-x628]
ATGACAACAGCAAAAATGGATCCGAAACTGTTGGATTCAATCATCATGAAAATGCTAAGTACAGTGGATGACAGCAAGGA
CGAAGTATTTAGAATAGGCGAGCAGTCCCGTCAGCAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAGCAGCAAG
TGAACGAAGTGATCGACTTTGGGGATAAACTAGAAGTCCATACGAGGCATGCCAGAAACCGTTTATCTGAGGTCAGCAGG
AATTTCAACAAATTCAGCGAAGATGAAATTAGAGAAGCTTACGAAAAAGCACATAATCTTCAAGTAGAACTCACCATGAT
ACAGCAGCGTGAAAAACAGTTGAGAGAAAGAAGAGACGATCTTGAAAGACGATTATTAAGCTTACAAGACGTTATCGAAC
GCTCTGAAACACTTGTCAGTCAAATCACTGTCGTTCTCAACTATCTCAATCAAGATTTACGTCAAGTGGGCGTTTTGCTT
GAAGATGCCCAAGCAAAACAAGATTTTGGTCTAAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTCTCAAGGGA
AATTCATGACGGTCCTGCACAAATGCTTGCAAACGTGATGATGCGTTCTGAATTAATAGAAAGGATTTTTAGAGACCGCG
GTACAGAGGAAGGCTTTAAGGAAATTAGAAGTCTTAGACAAAATGTTCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTCTAGATGATTTAGGTCTCATTCCAACATTAAGAAAATACTTAAACACAATTGAAGAGTA
TGATGGGAAAACAAAGATTACATTCCAATGCATTGGTGATACAGAAAGTGAACGAATTCCCTCTCAATTCGAGGTGGCAC
TTTTTAGACTAGCTCAAGAAGCTGTAACAAATTCTTTAAAACACTCTGAGGCAGAGGAAATCTCTGTAAAAGTAGAAGTA
ACGAAAGACTTTGCCACATTAATTATCAAAGACGATGGAAAAGGTTTTGATATGAAAGATGTCAAAACGAACAAGAACAA
ATCGTTTGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTAGAAGGTAAAATGACGATTGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTGCCATTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	84.675	98.465	0.834