Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | ABVJ71_RS01315 | Genome accession | NZ_CP159358 |
| Coordinates | 255358..255651 (+) | Length | 97 a.a. |
| NCBI ID | WP_353855251.1 | Uniprot ID | - |
| Organism | Bacillus sp. Bos-x628 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 250358..260651
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABVJ71_RS01280 | - | 250418..251056 (+) | 639 | WP_353855246.1 | MBL fold metallo-hydrolase | - |
| ABVJ71_RS01285 | - | 251134..251376 (-) | 243 | WP_003217440.1 | DUF2626 domain-containing protein | - |
| ABVJ71_RS01290 | - | 251591..251971 (+) | 381 | WP_353855247.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| ABVJ71_RS01300 | - | 252195..253070 (+) | 876 | WP_353855248.1 | STAS domain-containing protein | - |
| ABVJ71_RS01305 | comGA | 253250..254320 (+) | 1071 | WP_353855249.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABVJ71_RS01310 | comGB | 254262..255341 (+) | 1080 | WP_353855250.1 | competence type IV pilus assembly protein ComGB | - |
| ABVJ71_RS01315 | comGC | 255358..255651 (+) | 294 | WP_353855251.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABVJ71_RS01320 | comGD | 255644..256090 (+) | 447 | WP_353855252.1 | competence type IV pilus minor pilin ComGD | - |
| ABVJ71_RS01325 | - | 256110..256385 (+) | 276 | WP_353856505.1 | type II secretion system protein | - |
| ABVJ71_RS01330 | comGF | 256300..256827 (+) | 528 | WP_353855253.1 | competence type IV pilus minor pilin ComGF | - |
| ABVJ71_RS01335 | comGG | 256899..257207 (+) | 309 | WP_353855254.1 | competence type IV pilus minor pilin ComGG | - |
| ABVJ71_RS01340 | - | 257268..257459 (+) | 192 | WP_353855255.1 | YqzE family protein | - |
| ABVJ71_RS01345 | - | 257488..257769 (-) | 282 | WP_353856506.1 | DUF3889 domain-containing protein | - |
| ABVJ71_RS01350 | - | 258260..258442 (+) | 183 | WP_353855256.1 | hypothetical protein | - |
| ABVJ71_RS01355 | - | 258633..259211 (+) | 579 | WP_353855257.1 | signal peptidase I | - |
| ABVJ71_RS01360 | tasA | 259268..260070 (+) | 803 | Protein_269 | biofilm matrix protein TasA | - |
| ABVJ71_RS01365 | sinR | 260139..260474 (-) | 336 | WP_353856507.1 | transcriptional regulator SinR | Regulator |
Sequence
Protein
Download Length: 97 a.a. Molecular weight: 10680.57 Da Isoelectric Point: 6.7081
>NTDB_id=1013355 ABVJ71_RS01315 WP_353855251.1 255358..255651(+) (comGC) [Bacillus sp. Bos-x628]
MNEKAFTLLEMLIVMLVISILLLITIPNITRHHQSIQAKGCDGLKSMVSTQVMAYELEHDGKTPSLSELEKEGYVKKGLA
CPNGKAIVIQNGDVKNE
MNEKAFTLLEMLIVMLVISILLLITIPNITRHHQSIQAKGCDGLKSMVSTQVMAYELEHDGKTPSLSELEKEGYVKKGLA
CPNGKAIVIQNGDVKNE
Nucleotide
Download Length: 294 bp
>NTDB_id=1013355 ABVJ71_RS01315 WP_353855251.1 255358..255651(+) (comGC) [Bacillus sp. Bos-x628]
ATGAATGAAAAAGCTTTTACTCTGTTAGAAATGTTAATTGTCATGCTCGTTATTTCTATCCTTTTACTCATTACAATACC
AAATATCACACGGCATCATCAAAGCATTCAAGCAAAAGGCTGTGACGGTTTAAAGTCAATGGTAAGTACACAGGTGATGG
CTTATGAATTAGAGCATGATGGTAAAACGCCGTCATTATCTGAATTAGAAAAAGAAGGCTATGTCAAAAAGGGGTTAGCA
TGTCCTAACGGAAAAGCCATTGTGATTCAAAACGGCGACGTGAAAAATGAATAA
ATGAATGAAAAAGCTTTTACTCTGTTAGAAATGTTAATTGTCATGCTCGTTATTTCTATCCTTTTACTCATTACAATACC
AAATATCACACGGCATCATCAAAGCATTCAAGCAAAAGGCTGTGACGGTTTAAAGTCAATGGTAAGTACACAGGTGATGG
CTTATGAATTAGAGCATGATGGTAAAACGCCGTCATTATCTGAATTAGAAAAAGAAGGCTATGTCAAAAAGGGGTTAGCA
TGTCCTAACGGAAAAGCCATTGTGATTCAAAACGGCGACGTGAAAAATGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
64.948 |
100 |
0.649 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
94.845 |
0.392 |
| comGC | Staphylococcus aureus N315 |
41.304 |
94.845 |
0.392 |