Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ABVJ71_RS01305 | Genome accession | NZ_CP159358 |
| Coordinates | 253250..254320 (+) | Length | 356 a.a. |
| NCBI ID | WP_353855249.1 | Uniprot ID | - |
| Organism | Bacillus sp. Bos-x628 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 248250..259320
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABVJ71_RS01270 | - | 249552..249866 (+) | 315 | WP_353855244.1 | MTH1187 family thiamine-binding protein | - |
| ABVJ71_RS01275 | - | 250088..250261 (-) | 174 | WP_353855245.1 | DUF2759 domain-containing protein | - |
| ABVJ71_RS01280 | - | 250418..251056 (+) | 639 | WP_353855246.1 | MBL fold metallo-hydrolase | - |
| ABVJ71_RS01285 | - | 251134..251376 (-) | 243 | WP_003217440.1 | DUF2626 domain-containing protein | - |
| ABVJ71_RS01290 | - | 251591..251971 (+) | 381 | WP_353855247.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| ABVJ71_RS01300 | - | 252195..253070 (+) | 876 | WP_353855248.1 | STAS domain-containing protein | - |
| ABVJ71_RS01305 | comGA | 253250..254320 (+) | 1071 | WP_353855249.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ABVJ71_RS01310 | comGB | 254262..255341 (+) | 1080 | WP_353855250.1 | competence type IV pilus assembly protein ComGB | - |
| ABVJ71_RS01315 | comGC | 255358..255651 (+) | 294 | WP_353855251.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ABVJ71_RS01320 | comGD | 255644..256090 (+) | 447 | WP_353855252.1 | competence type IV pilus minor pilin ComGD | - |
| ABVJ71_RS01325 | - | 256110..256385 (+) | 276 | WP_353856505.1 | type II secretion system protein | - |
| ABVJ71_RS01330 | comGF | 256300..256827 (+) | 528 | WP_353855253.1 | competence type IV pilus minor pilin ComGF | - |
| ABVJ71_RS01335 | comGG | 256899..257207 (+) | 309 | WP_353855254.1 | competence type IV pilus minor pilin ComGG | - |
| ABVJ71_RS01340 | - | 257268..257459 (+) | 192 | WP_353855255.1 | YqzE family protein | - |
| ABVJ71_RS01345 | - | 257488..257769 (-) | 282 | WP_353856506.1 | DUF3889 domain-containing protein | - |
| ABVJ71_RS01350 | - | 258260..258442 (+) | 183 | WP_353855256.1 | hypothetical protein | - |
| ABVJ71_RS01355 | - | 258633..259211 (+) | 579 | WP_353855257.1 | signal peptidase I | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40348.63 Da Isoelectric Point: 8.6596
>NTDB_id=1013354 ABVJ71_RS01305 WP_353855249.1 253250..254320(+) (comGA) [Bacillus sp. Bos-x628]
MYGIEYLGQDLLEEACRMRASDVHIVPREKEASVSFRVDSDLIQKRIIDKKSGERLIAHFKFLSSMDIGEKRRPQNGSLA
VMLRTGQVFVRMSTLPTVYDESLVIRLLPQEHVPETKYLSLFPKASARLLSFLNHSHGLILFTGPTNSGKTTTLYSLIQF
AKKHFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGLRAILRHDPDMIVLGEIRDAETAQTAIRAAMTGHLVMSTLH
AKNAKGALYRMLEFGVTLNEIEQTMVAIAAQRLIDITCPFCGETCQLYCKLNRTARRTNVFELLYGKELSECIKEAKGEH
AHASYETLQRLIRKGVALGYLSKNTYHRWVYEESTL
MYGIEYLGQDLLEEACRMRASDVHIVPREKEASVSFRVDSDLIQKRIIDKKSGERLIAHFKFLSSMDIGEKRRPQNGSLA
VMLRTGQVFVRMSTLPTVYDESLVIRLLPQEHVPETKYLSLFPKASARLLSFLNHSHGLILFTGPTNSGKTTTLYSLIQF
AKKHFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGLRAILRHDPDMIVLGEIRDAETAQTAIRAAMTGHLVMSTLH
AKNAKGALYRMLEFGVTLNEIEQTMVAIAAQRLIDITCPFCGETCQLYCKLNRTARRTNVFELLYGKELSECIKEAKGEH
AHASYETLQRLIRKGVALGYLSKNTYHRWVYEESTL
Nucleotide
Download Length: 1071 bp
>NTDB_id=1013354 ABVJ71_RS01305 WP_353855249.1 253250..254320(+) (comGA) [Bacillus sp. Bos-x628]
TTGTATGGTATTGAATATTTAGGACAAGATCTGCTAGAAGAAGCATGCCGAATGAGAGCATCTGATGTGCACATTGTCCC
AAGAGAAAAAGAAGCTTCGGTTTCTTTTCGAGTAGACTCAGATTTGATTCAAAAACGAATCATTGATAAAAAGAGTGGGG
AGCGATTAATTGCTCATTTTAAATTTTTATCATCAATGGATATCGGTGAAAAAAGGAGACCGCAAAATGGGTCATTAGCT
GTCATGCTAAGAACTGGTCAAGTCTTTGTTCGGATGTCTACATTGCCAACTGTGTATGATGAAAGTCTAGTTATTAGACT
TTTACCGCAAGAACATGTGCCAGAAACCAAATATCTCTCCTTATTCCCAAAAGCTTCCGCAAGATTATTATCGTTTCTTA
ATCATTCACACGGACTTATTTTATTTACTGGACCAACAAATTCAGGAAAAACCACGACACTCTATTCGTTGATCCAATTT
GCAAAAAAACACTTTAATCGAAATATTATTACGCTTGAAGATCCTGTTGAGACTAGAAATGAAGAAGTTTTACAAGTGCA
AGTAAATGAGAAAGCTGGCATTACGTATGCGGCAGGTTTACGAGCCATTTTAAGACATGATCCAGACATGATTGTGCTAG
GTGAAATAAGAGATGCTGAAACGGCGCAAACGGCAATTAGAGCTGCGATGACTGGACATTTAGTAATGAGTACATTACAT
GCGAAAAATGCAAAAGGAGCCCTTTATCGAATGCTTGAATTTGGTGTAACGCTGAATGAGATTGAACAAACAATGGTGGC
GATTGCCGCACAGCGATTAATAGATATAACATGCCCTTTTTGTGGTGAAACGTGCCAGCTTTACTGTAAATTAAACCGAA
CAGCCAGACGTACAAATGTGTTTGAACTGCTGTACGGAAAAGAGCTTAGTGAGTGTATAAAAGAAGCAAAAGGAGAACAC
GCTCATGCATCATATGAAACACTGCAAAGATTAATTCGAAAAGGAGTTGCGCTTGGCTATTTATCTAAAAACACCTATCA
TCGCTGGGTTTATGAAGAATCGACACTATAA
TTGTATGGTATTGAATATTTAGGACAAGATCTGCTAGAAGAAGCATGCCGAATGAGAGCATCTGATGTGCACATTGTCCC
AAGAGAAAAAGAAGCTTCGGTTTCTTTTCGAGTAGACTCAGATTTGATTCAAAAACGAATCATTGATAAAAAGAGTGGGG
AGCGATTAATTGCTCATTTTAAATTTTTATCATCAATGGATATCGGTGAAAAAAGGAGACCGCAAAATGGGTCATTAGCT
GTCATGCTAAGAACTGGTCAAGTCTTTGTTCGGATGTCTACATTGCCAACTGTGTATGATGAAAGTCTAGTTATTAGACT
TTTACCGCAAGAACATGTGCCAGAAACCAAATATCTCTCCTTATTCCCAAAAGCTTCCGCAAGATTATTATCGTTTCTTA
ATCATTCACACGGACTTATTTTATTTACTGGACCAACAAATTCAGGAAAAACCACGACACTCTATTCGTTGATCCAATTT
GCAAAAAAACACTTTAATCGAAATATTATTACGCTTGAAGATCCTGTTGAGACTAGAAATGAAGAAGTTTTACAAGTGCA
AGTAAATGAGAAAGCTGGCATTACGTATGCGGCAGGTTTACGAGCCATTTTAAGACATGATCCAGACATGATTGTGCTAG
GTGAAATAAGAGATGCTGAAACGGCGCAAACGGCAATTAGAGCTGCGATGACTGGACATTTAGTAATGAGTACATTACAT
GCGAAAAATGCAAAAGGAGCCCTTTATCGAATGCTTGAATTTGGTGTAACGCTGAATGAGATTGAACAAACAATGGTGGC
GATTGCCGCACAGCGATTAATAGATATAACATGCCCTTTTTGTGGTGAAACGTGCCAGCTTTACTGTAAATTAAACCGAA
CAGCCAGACGTACAAATGTGTTTGAACTGCTGTACGGAAAAGAGCTTAGTGAGTGTATAAAAGAAGCAAAAGGAGAACAC
GCTCATGCATCATATGAAACACTGCAAAGATTAATTCGAAAAGGAGTTGCGCTTGGCTATTTATCTAAAAACACCTATCA
TCGCTGGGTTTATGAAGAATCGACACTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
65.819 |
99.438 |
0.654 |