Detailed information NTG1011782

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABOX98_RS29930
• Genome accession: NZ_CP158570
• Coordinates: 6314782..6315846 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain SRPA1308
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6309782..6320846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABOX98_RS29905 (ABOX98_29905)	aroK	6310317..6310835 (-)	519	WP_003095833.1	shikimate kinase AroK	-
ABOX98_RS29910 (ABOX98_29910)	pilQ	6310847..6312991 (-)	2145	WP_031686163.1	type 4a pilus secretin PilQ	Machinery gene
ABOX98_RS29915 (ABOX98_29915)	pilP	6313045..6313569 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
ABOX98_RS29920 (ABOX98_29920)	pilO	6313566..6314189 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
ABOX98_RS29925 (ABOX98_29925)	pilN	6314186..6314782 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
ABOX98_RS29930 (ABOX98_29930)	pilM	6314782..6315846 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
ABOX98_RS29935 (ABOX98_29935)	-	6316031..6318502 (+)	2472	WP_031686164.1	penicillin-binding protein 1A	-
ABOX98_RS29940 (ABOX98_29940)	-	6318598..6319866 (-)	1269	WP_003095842.1	malic enzyme	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1011782 ABOX98_RS29930 WP_003110888.1 6314782..6315846(-) (pilM) [Pseudomonas aeruginosa strain SRPA1308]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1011782 ABOX98_RS29930 WP_003110888.1 6314782..6315846(-) (pilM) [Pseudomonas aeruginosa strain SRPA1308]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGCTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTTGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTTTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466