Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ABS324_RS03805 | Genome accession | NZ_CP158496 |
| Coordinates | 739225..739737 (+) | Length | 170 a.a. |
| NCBI ID | WP_000981966.1 | Uniprot ID | A0A0A3WKS9 |
| Organism | Bacillus cereus strain NBNZ-2162 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 734225..744737
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABS324_RS03775 (ABS324_03775) | spo0J | 734673..735524 (+) | 852 | WP_001051832.1 | stage 0 sporulation protein Spo0J | - |
| ABS324_RS03780 (ABS324_03780) | yyaC | 735545..736141 (-) | 597 | WP_053513691.1 | spore protease YyaC | - |
| ABS324_RS03785 (ABS324_03785) | - | 736401..737282 (+) | 882 | WP_000364809.1 | mechanosensitive ion channel family protein | - |
| ABS324_RS03790 (ABS324_03790) | - | 737303..737500 (+) | 198 | WP_000435485.1 | DUF951 domain-containing protein | - |
| ABS324_RS03795 (ABS324_03795) | ychF | 737616..738716 (+) | 1101 | WP_000524667.1 | redox-regulated ATPase YchF | - |
| ABS324_RS03800 (ABS324_03800) | rpsF | 738908..739198 (+) | 291 | WP_001233778.1 | 30S ribosomal protein S6 | - |
| ABS324_RS03805 (ABS324_03805) | ssbA | 739225..739737 (+) | 513 | WP_000981966.1 | single-stranded DNA-binding protein | Machinery gene |
| ABS324_RS03810 (ABS324_03810) | rpsR | 739783..740016 (+) | 234 | WP_000918873.1 | 30S ribosomal protein S18 | - |
| ABS324_RS03815 (ABS324_03815) | - | 740097..741032 (+) | 936 | WP_136986536.1 | YybS family protein | - |
| ABS324_RS03820 (ABS324_03820) | - | 741111..743084 (+) | 1974 | WP_001113787.1 | DHH family phosphoesterase | - |
| ABS324_RS03825 (ABS324_03825) | rplI | 743081..743527 (+) | 447 | WP_000864228.1 | 50S ribosomal protein L9 | - |
Sequence
Protein
Download Length: 170 a.a. Molecular weight: 18494.29 Da Isoelectric Point: 4.9327
>NTDB_id=1011593 ABS324_RS03805 WP_000981966.1 739225..739737(+) (ssbA) [Bacillus cereus strain NBNZ-2162]
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
MMNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTR
NYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQGSNPFGQSSNSGNQGNSGFTKNDDPFSNVGQP
IDISDDDLPF
Nucleotide
Download Length: 513 bp
>NTDB_id=1011593 ABS324_RS03805 WP_000981966.1 739225..739737(+) (ssbA) [Bacillus cereus strain NBNZ-2162]
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAATCAAGGTAACTCTGGGTTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
TTGATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGC
TACTTTTACGTTAGCTGTGAATCGCGCATTTGCCAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATAT
GGCGTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGT
AATTACGAGGGACAAGATGGTAAACGTGTATACGTAACAGAAGTTCTTGCGGAAAGCGTGCAATTTTTAGAGCCGCGTAA
TGGCGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAGGCTCTAACCCATTTG
GTCAATCTAGTAATTCAGGTAATCAAGGTAACTCTGGGTTTACGAAGAATGACGATCCATTTTCAAATGTAGGTCAACCG
ATCGACATTTCCGACGACGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
72.571 |
100 |
0.747 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.621 |
100 |
0.6 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
65.094 |
62.353 |
0.406 |
| ssb | Glaesserella parasuis strain SC1401 |
37.43 |
100 |
0.394 |