Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | UXQ28_RS10250 | Genome accession | NZ_CP158488 |
| Coordinates | 2069600..2070070 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain BSN92 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2040619..2094197 | 2069600..2070070 | within | 0 |
Gene organization within MGE regions
Location: 2040619..2094197
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UXQ28_RS10040 (UXQ28_10040) | scn | 2040619..2040969 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| UXQ28_RS10045 (UXQ28_10045) | - | 2041654..2042103 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| UXQ28_RS10050 (UXQ28_10050) | - | 2042198..2042533 (-) | 336 | Protein_1944 | SH3 domain-containing protein | - |
| UXQ28_RS10055 (UXQ28_10055) | sak | 2043183..2043674 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| UXQ28_RS10060 (UXQ28_10060) | - | 2043865..2044620 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| UXQ28_RS10065 (UXQ28_10065) | - | 2044632..2044886 (-) | 255 | WP_000611512.1 | phage holin | - |
| UXQ28_RS10070 (UXQ28_10070) | - | 2044938..2045045 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| UXQ28_RS10075 (UXQ28_10075) | pepG1 | 2045098..2045232 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| UXQ28_RS10080 (UXQ28_10080) | - | 2045424..2045720 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| UXQ28_RS10085 (UXQ28_10085) | - | 2045778..2046065 (-) | 288 | WP_001040261.1 | hypothetical protein | - |
| UXQ28_RS10090 (UXQ28_10090) | - | 2046112..2046264 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| UXQ28_RS10095 (UXQ28_10095) | - | 2046254..2050039 (-) | 3786 | WP_337258841.1 | phage tail spike protein | - |
| UXQ28_RS10100 (UXQ28_10100) | - | 2050055..2051539 (-) | 1485 | WP_000567396.1 | phage tail domain-containing protein | - |
| UXQ28_RS10105 (UXQ28_10105) | - | 2051536..2056068 (-) | 4533 | WP_337258842.1 | phage tail tape measure protein | - |
| UXQ28_RS10110 (UXQ28_10110) | - | 2056125..2056262 (-) | 138 | WP_001549167.1 | hypothetical protein | - |
| UXQ28_RS10115 (UXQ28_10115) | - | 2056313..2056663 (-) | 351 | WP_001096355.1 | hypothetical protein | - |
| UXQ28_RS10120 (UXQ28_10120) | - | 2056713..2056943 (-) | 231 | Protein_1958 | Ig-like domain-containing protein | - |
| UXQ28_RS10125 (UXQ28_10125) | - | 2056979..2057623 (-) | 645 | WP_000985142.1 | major tail protein | - |
| UXQ28_RS10130 (UXQ28_10130) | - | 2057624..2058031 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| UXQ28_RS10135 (UXQ28_10135) | - | 2058028..2058432 (-) | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| UXQ28_RS10140 (UXQ28_10140) | - | 2058429..2058791 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| UXQ28_RS10145 (UXQ28_10145) | - | 2058775..2059059 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| UXQ28_RS10150 (UXQ28_10150) | - | 2059049..2059333 (-) | 285 | WP_000238241.1 | hypothetical protein | - |
| UXQ28_RS10155 (UXQ28_10155) | - | 2059353..2060498 (-) | 1146 | WP_000154568.1 | phage major capsid protein | - |
| UXQ28_RS10160 (UXQ28_10160) | - | 2060521..2061258 (-) | 738 | WP_000861911.1 | head maturation protease, ClpP-related | - |
| UXQ28_RS10165 (UXQ28_10165) | - | 2061242..2062405 (-) | 1164 | WP_000025268.1 | phage portal protein | - |
| UXQ28_RS10170 (UXQ28_10170) | - | 2062421..2064082 (-) | 1662 | WP_000625096.1 | terminase large subunit | - |
| UXQ28_RS10175 (UXQ28_10175) | - | 2064079..2064423 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| UXQ28_RS10180 (UXQ28_10180) | - | 2064554..2064853 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| UXQ28_RS10185 (UXQ28_10185) | - | 2065085..2065501 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| UXQ28_RS10190 (UXQ28_10190) | - | 2065529..2065729 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| UXQ28_RS10195 (UXQ28_10195) | - | 2065729..2065878 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| UXQ28_RS10200 (UXQ28_10200) | - | 2065875..2066081 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| UXQ28_RS10205 (UXQ28_10205) | - | 2066078..2066323 (-) | 246 | WP_001282077.1 | hypothetical protein | - |
| UXQ28_RS10210 (UXQ28_10210) | - | 2066360..2066896 (-) | 537 | WP_000185693.1 | dUTPase | - |
| UXQ28_RS10215 (UXQ28_10215) | - | 2066893..2067138 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| UXQ28_RS10220 (UXQ28_10220) | - | 2067153..2067401 (-) | 249 | WP_000178987.1 | SAV1978 family virulence-associated passenger protein | - |
| UXQ28_RS10225 (UXQ28_10225) | - | 2067398..2067655 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| UXQ28_RS10230 (UXQ28_10230) | - | 2067655..2068026 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| UXQ28_RS10235 (UXQ28_10235) | - | 2068039..2068443 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| UXQ28_RS10240 (UXQ28_10240) | - | 2068452..2068670 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| UXQ28_RS10245 (UXQ28_10245) | - | 2068677..2069570 (-) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| UXQ28_RS10250 (UXQ28_10250) | ssbA | 2069600..2070070 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| UXQ28_RS10255 (UXQ28_10255) | - | 2070071..2070688 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| UXQ28_RS10260 (UXQ28_10260) | - | 2070769..2071689 (-) | 921 | WP_278198740.1 | recombinase RecT | - |
| UXQ28_RS10265 (UXQ28_10265) | - | 2071691..2073634 (-) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| UXQ28_RS10270 (UXQ28_10270) | - | 2073643..2073906 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| UXQ28_RS10275 (UXQ28_10275) | - | 2073915..2074175 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| UXQ28_RS10280 (UXQ28_10280) | - | 2074180..2074482 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| UXQ28_RS10285 (UXQ28_10285) | - | 2074577..2074738 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| UXQ28_RS10290 (UXQ28_10290) | - | 2074735..2075058 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| UXQ28_RS10295 (UXQ28_10295) | - | 2075113..2075493 (+) | 381 | WP_337258843.1 | DUF2513 domain-containing protein | - |
| UXQ28_RS10300 (UXQ28_10300) | - | 2075480..2075677 (-) | 198 | WP_001148862.1 | hypothetical protein | - |
| UXQ28_RS10305 (UXQ28_10305) | - | 2075693..2076442 (-) | 750 | WP_001148338.1 | phage antirepressor KilAC domain-containing protein | - |
| UXQ28_RS10310 (UXQ28_10310) | - | 2076499..2076708 (+) | 210 | WP_000772137.1 | hypothetical protein | - |
| UXQ28_RS10315 (UXQ28_10315) | - | 2076701..2076841 (-) | 141 | WP_000939495.1 | hypothetical protein | - |
| UXQ28_RS10320 (UXQ28_10320) | - | 2076856..2077299 (-) | 444 | WP_000435360.1 | hypothetical protein | - |
| UXQ28_RS10325 (UXQ28_10325) | - | 2077312..2077554 (-) | 243 | WP_000639923.1 | DUF739 family protein | - |
| UXQ28_RS10330 (UXQ28_10330) | - | 2077718..2078434 (+) | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| UXQ28_RS10335 (UXQ28_10335) | - | 2078446..2079300 (+) | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| UXQ28_RS10340 (UXQ28_10340) | - | 2079374..2079520 (+) | 147 | WP_000345949.1 | hypothetical protein | - |
| UXQ28_RS10345 (UXQ28_10345) | - | 2079517..2079702 (+) | 186 | WP_000109189.1 | hypothetical protein | - |
| UXQ28_RS10350 (UXQ28_10350) | - | 2079773..2079955 (+) | 183 | WP_000705245.1 | hypothetical protein | - |
| UXQ28_RS10355 (UXQ28_10355) | - | 2080034..2080747 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| UXQ28_RS10360 (UXQ28_10360) | - | 2080938..2081975 (+) | 1038 | WP_000857200.1 | site-specific integrase | - |
| UXQ28_RS10365 (UXQ28_10365) | sph | 2082026..2082856 (+) | 831 | Protein_2007 | sphingomyelin phosphodiesterase | - |
| UXQ28_RS10370 (UXQ28_10370) | lukG | 2083094..2084110 (-) | 1017 | WP_000595396.1 | bi-component leukocidin LukGH subunit G | - |
| UXQ28_RS10375 (UXQ28_10375) | lukH | 2084132..2085187 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| UXQ28_RS10380 (UXQ28_10380) | - | 2085623..2086846 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| UXQ28_RS10385 (UXQ28_10385) | - | 2087349..2088656 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| UXQ28_RS10390 (UXQ28_10390) | groL | 2089196..2090812 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| UXQ28_RS10395 (UXQ28_10395) | groES | 2090888..2091172 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| UXQ28_RS10400 (UXQ28_10400) | mroQ | 2091347..2092090 (+) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| UXQ28_RS10405 (UXQ28_10405) | - | 2092115..2093374 (-) | 1260 | WP_000120297.1 | SdrH family protein | - |
| UXQ28_RS10410 (UXQ28_10410) | - | 2093571..2094197 (+) | 627 | WP_000522381.1 | nitroreductase family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1011555 UXQ28_RS10250 WP_000934759.1 2069600..2070070(-) (ssbA) [Staphylococcus aureus strain BSN92]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1011555 UXQ28_RS10250 WP_000934759.1 2069600..2070070(-) (ssbA) [Staphylococcus aureus strain BSN92]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |