Detailed information NTG1011015

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LLUC023_RS09160
• Genome accession: NZ_CP158368
• Coordinates: 1805456..1806439 (-)
• Length: 327 a.a.
• NCBI ID: WP_021211801.1
• Uniprot ID: A0A896TBW3
• Organism: Lactococcus cremoris strain UC023
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1800456..1811439

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUC023_RS09145 (LLUC023_09155)	-	1801808..1802734 (-)	927	WP_014572243.1	peptidyl-prolyl cis-trans isomerase	-
LLUC023_RS09150 (LLUC023_09160)	-	1802890..1803573 (-)	684	WP_011676723.1	O-methyltransferase	-
LLUC023_RS09155 (LLUC023_09165)	pepF	1803576..1805381 (-)	1806	WP_021165608.1	oligoendopeptidase F	Regulator
LLUC023_RS09160 (LLUC023_09170)	coiA	1805456..1806439 (-)	984	WP_021211801.1	competence protein CoiA	Machinery gene
LLUC023_RS09165 (LLUC023_09175)	-	1806514..1807599 (-)	1086	WP_014572240.1	YdcF family protein	-
LLUC023_RS09170 (LLUC023_09180)	-	1807753..1808340 (-)	588	WP_014572239.1	alpha/beta hydrolase	-
LLUC023_RS09175 (LLUC023_09185)	-	1808379..1808576 (-)	198	WP_250638141.1	alpha/beta hydrolase	-
LLUC023_RS09180 (LLUC023_09190)	-	1808809..1810230 (-)	1422	WP_011676727.1	NCS2 family permease	-
LLUC023_RS09185 (LLUC023_09195)	-	1810541..1811377 (+)	837	WP_205288354.1	HAD family hydrolase	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 39138.89 Da
• Isoelectric Point: 9.6994

>NTDB_id=1011015 LLUC023_RS09160 WP_021211801.1 1805456..1806439(-) (coiA) [Lactococcus cremoris strain UC023]
MLTAIDENNKIINLLELERKELTGKFYCPSCHAELLIKNGQIKVLHFAHKSLKSCNLWLENESEQHLGLKKILYQWFKRT
DKVEIERYLPELNQRPDLLVNDKIAIEIQCSHLSIKRLKERTENYKAHGFKVLWLMGKDLWLAEQVTKLQKNLVYFSENR
GFFYWELDFQRKKLRLKSLIHEDLRGRIICLQEEIPFGKGRLIAHLRLPYLAQKLVKIPTFKDPKLSSFIRQQLYYQSLK
WMKIQEKYYQKGENLLTKKFEGPYIAPLGLNLLESFTDEMTITTFTQIDQNVKLYYENFLIDFQRNSLEMLYPPCFYAIM
GKQKKEK

Nucleotide

• Length: 984 bp

>NTDB_id=1011015 LLUC023_RS09160 WP_021211801.1 1805456..1806439(-) (coiA) [Lactococcus cremoris strain UC023]
ATGCTGACAGCAATTGATGAAAATAATAAAATAATAAACTTACTGGAATTAGAACGCAAAGAATTGACCGGGAAATTTTA
TTGTCCTTCTTGTCATGCAGAGCTACTTATTAAAAATGGGCAGATAAAAGTTCTTCATTTTGCCCATAAATCTCTAAAGA
GCTGCAATTTATGGTTGGAAAATGAGTCAGAACAGCATTTAGGTTTGAAAAAAATATTATATCAGTGGTTTAAAAGGACT
GACAAAGTCGAAATTGAACGCTATTTGCCCGAACTTAACCAAAGACCAGATTTATTAGTAAATGACAAAATCGCTATTGA
GATACAATGCTCTCATTTATCTATTAAGCGCCTCAAAGAACGTACAGAAAATTATAAGGCGCATGGCTTTAAAGTGCTTT
GGTTGATGGGAAAGGATTTATGGCTGGCTGAACAGGTGACAAAACTTCAAAAAAATTTAGTTTATTTCTCGGAAAATAGA
GGATTCTTTTATTGGGAGTTAGATTTTCAGAGGAAAAAATTAAGATTAAAATCTCTTATTCATGAGGATTTACGCGGCAG
AATCATTTGCTTACAAGAGGAAATTCCTTTTGGAAAAGGACGACTTATTGCGCATCTACGCTTACCTTATTTGGCGCAAA
AACTGGTGAAAATTCCTACTTTTAAAGATCCTAAACTTTCTAGTTTTATTCGTCAGCAATTATACTATCAATCACTAAAA
TGGATGAAAATTCAAGAAAAATATTATCAAAAAGGAGAAAATTTACTGACGAAAAAATTTGAAGGTCCATACATTGCTCC
ACTAGGTTTAAATTTACTAGAGAGTTTTACTGACGAAATGACGATCACAACTTTTACTCAGATTGATCAAAATGTTAAGC
TTTACTATGAAAATTTTTTAATAGATTTCCAAAGAAATAGCCTTGAAATGCTCTATCCTCCCTGTTTCTATGCTATAATG
GGAAAGCAGAAAAAGGAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	96.636	100	0.966
coiA	Streptococcus mitis NCTC 12261	44.136	99.083	0.437
coiA	Streptococcus pneumoniae TIGR4	43.519	99.083	0.431
coiA	Streptococcus pneumoniae Rx1	43.519	99.083	0.431
coiA	Streptococcus pneumoniae D39	43.519	99.083	0.431
coiA	Streptococcus pneumoniae R6	43.519	99.083	0.431