Detailed information NTG1010076

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: H0513_RS05935
• Genome accession: NZ_LR822023
• Coordinates: 1104968..1105849 (-)
• Length: 293 a.a.
• NCBI ID: WP_084828863.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus isolate STH_CIRM_368
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1099968..1110849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H0513_RS05900 (STHERMO_1321)	-	1100048..1100698 (+)	651	WP_179971939.1	amino acid ABC transporter permease	-
H0513_RS05905 (STHERMO_1323)	-	1100762..1102018 (-)	1257	WP_179971940.1	ISL3 family transposase	-
H0513_RS05910 (STHERMO_1324)	-	1102150..1102626 (-)	477	WP_179971941.1	transposase	-
H0513_RS11595	-	1102669..1102818 (+)	150	WP_179973008.1	hypothetical protein	-
H0513_RS05920	-	1102880..1103407 (+)	528	WP_179971942.1	HdeD family acid-resistance protein	-
H0513_RS11060 (STHERMO_1328)	-	1103536..1104793 (-)	1258	Protein_1107	ISL3 family transposase	-
H0513_RS05935 (STHERMO_1329)	endA	1104968..1105849 (-)	882	WP_084828863.1	DNA/RNA non-specific endonuclease	Machinery gene
H0513_RS05940 (STHERMO_1330)	-	1105911..1106099 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
H0513_RS05945 (STHERMO_1331)	murA	1106101..1107372 (-)	1272	WP_179971943.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
H0513_RS05950 (STHERMO_1332)	-	1107442..1107678 (-)	237	WP_002946959.1	DUF1146 family protein	-
H0513_RS05955 (STHERMO_1333)	galE	1107866..1108879 (-)	1014	WP_179971944.1	UDP-glucose 4-epimerase GalE	-
H0513_RS05960 (STHERMO_1334)	-	1108894..1110303 (-)	1410	WP_415669551.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31768.48 Da
• Isoelectric Point: 10.0031

>NTDB_id=1010076 H0513_RS05935 WP_084828863.1 1104968..1105849(-) (endA) [Streptococcus thermophilus isolate STH_CIRM_368]
MAKGKTSLTNKQKRQFVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNYLTNSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINGNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDNSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=1010076 H0513_RS05935 WP_084828863.1 1104968..1105849(-) (endA) [Streptococcus thermophilus isolate STH_CIRM_368]
ATGGCAAAAGGAAAAACATCTTTGACAAATAAACAGAAACGTCAGTTCGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGCAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGAAAAT
CTAATAAATCCATTAAATCTAATTATTTAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGAGCCTATATTATTAATGGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCTTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAATTCTACAGGTCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCTTGATTTATGAAGGAGAGAACCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGATC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATAACCCTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterProScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (98-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	75.893	76.451	0.58
endA	Streptococcus pneumoniae D39	75.893	76.451	0.58
endA	Streptococcus pneumoniae R6	75.893	76.451	0.58
endA	Streptococcus pneumoniae TIGR4	75.893	76.451	0.58