Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ABNQ20_RS26935 | Genome accession | NZ_CP158051 |
| Coordinates | 5786534..5787058 (+) | Length | 174 a.a. |
| NCBI ID | WP_003116261.1 | Uniprot ID | Q7WZP2 |
| Organism | Pseudomonas aeruginosa strain P1110 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5781534..5792058
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABNQ20_RS26915 (ABNQ20_26910) | pilR | 5782796..5784133 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| ABNQ20_RS26920 (ABNQ20_26915) | thiO | 5784179..5785273 (-) | 1095 | WP_003141551.1 | glycine oxidase ThiO | - |
| ABNQ20_RS26925 (ABNQ20_26920) | - | 5785413..5785913 (+) | 501 | WP_016254062.1 | GspH/FimT family pseudopilin | - |
| ABNQ20_RS26930 (ABNQ20_26925) | - | 5786036..5786524 (+) | 489 | WP_003141552.1 | GspH/FimT family pseudopilin | - |
| ABNQ20_RS26935 (ABNQ20_26930) | pilV | 5786534..5787058 (+) | 525 | WP_003116261.1 | type IV pilus modification protein PilV | Machinery gene |
| ABNQ20_RS26940 (ABNQ20_26935) | - | 5787067..5787882 (+) | 816 | WP_016254061.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| ABNQ20_RS26945 (ABNQ20_26940) | - | 5787879..5788484 (+) | 606 | WP_003116263.1 | pilus assembly protein | - |
| ABNQ20_RS26950 (ABNQ20_26945) | - | 5788498..5791974 (+) | 3477 | WP_003141555.1 | type IV pilus biogenesis factor PilY1 | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18763.51 Da Isoelectric Point: 4.9113
>NTDB_id=1009708 ABNQ20_RS26935 WP_003116261.1 5786534..5787058(+) (pilV) [Pseudomonas aeruginosa strain P1110]
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
MSRETGFSMIEVLVALVLISIGVLGMVAMQGRTIQYTQESVQRNAAAMLASDLMEIMRADPDAVLNLRAQLREDSVYYKA
KGSDFPAAPARCAPLPADAKERLGCWAQQASKDLPGASALLNSQFYICRSPTPGTCDNTKGSAIEIQVAWRAMDGACFNA
SDSTLCTYSVRSEL
Nucleotide
Download Length: 525 bp
>NTDB_id=1009708 ABNQ20_RS26935 WP_003116261.1 5786534..5787058(+) (pilV) [Pseudomonas aeruginosa strain P1110]
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
ATGTCTCGAGAAACGGGTTTCAGCATGATCGAAGTACTGGTTGCTCTGGTGCTGATCAGCATTGGCGTACTGGGCATGGT
TGCCATGCAAGGGCGCACGATCCAGTACACGCAGGAGTCGGTACAACGCAATGCCGCAGCAATGCTTGCTAGCGACCTGA
TGGAAATAATGCGTGCGGACCCAGATGCCGTACTCAATCTACGCGCCCAACTACGCGAAGACTCGGTCTACTACAAGGCC
AAGGGCAGCGACTTTCCCGCAGCCCCAGCGCGCTGCGCGCCATTGCCAGCAGATGCTAAGGAACGTCTCGGCTGCTGGGC
CCAACAGGCCTCGAAAGACTTGCCGGGAGCCTCCGCACTCTTGAATAGCCAATTCTACATTTGTCGCAGCCCAACCCCGG
GTACCTGCGACAACACCAAAGGCTCGGCCATCGAAATCCAGGTTGCCTGGCGAGCCATGGATGGAGCGTGTTTCAACGCC
TCTGACTCCACCTTGTGCACCTACAGCGTCCGCTCCGAATTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
59.429 |
100 |
0.598 |