Detailed information NTG1009707

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABNQ20_RS26915
• Genome accession: NZ_CP158051
• Coordinates: 5782796..5784133 (+)
• Length: 445 a.a.
• NCBI ID: WP_003094694.1
• Uniprot ID: A0A0H2ZG94
• Organism: Pseudomonas aeruginosa strain P1110
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5777796..5789133

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABNQ20_RS26890 (ABNQ20_26885)	pgeF	5777939..5778667 (-)	729	WP_003094684.1	peptidoglycan editing factor PgeF	-
ABNQ20_RS26895 (ABNQ20_26890)	rluD	5778664..5779626 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ABNQ20_RS26900 (ABNQ20_26895)	-	5779772..5780797 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
ABNQ20_RS26905 (ABNQ20_26900)	-	5780954..5781199 (+)	246	WP_003102591.1	PP0621 family protein	-
ABNQ20_RS26910 (ABNQ20_26905)	pilS	5781189..5782781 (+)	1593	WP_003094692.1	two-component system sensor histidine kinase PilS	Regulator
ABNQ20_RS26915 (ABNQ20_26910)	pilR	5782796..5784133 (+)	1338	WP_003094694.1	two-component system response regulator PilR	Regulator
ABNQ20_RS26920 (ABNQ20_26915)	thiO	5784179..5785273 (-)	1095	WP_003141551.1	glycine oxidase ThiO	-
ABNQ20_RS26925 (ABNQ20_26920)	-	5785413..5785913 (+)	501	WP_016254062.1	GspH/FimT family pseudopilin	-
ABNQ20_RS26930 (ABNQ20_26925)	-	5786036..5786524 (+)	489	WP_003141552.1	GspH/FimT family pseudopilin	-
ABNQ20_RS26935 (ABNQ20_26930)	pilV	5786534..5787058 (+)	525	WP_003116261.1	type IV pilus modification protein PilV	Machinery gene
ABNQ20_RS26940 (ABNQ20_26935)	-	5787067..5787882 (+)	816	WP_016254061.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
ABNQ20_RS26945 (ABNQ20_26940)	-	5787879..5788484 (+)	606	WP_003116263.1	pilus assembly protein	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49737.06 Da
• Isoelectric Point: 5.8654

>NTDB_id=1009707 ABNQ20_RS26915 WP_003094694.1 5782796..5784133(+) (pilR) [Pseudomonas aeruginosa strain P1110]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLAERI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1009707 ABNQ20_RS26915 WP_003094694.1 5782796..5784133(+) (pilR) [Pseudomonas aeruginosa strain P1110]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTACGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGCAGCGGCAAGGAACTGGTGGCGCGCCTGATCCACGAGCAGGGGCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGTGGCACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGGGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCACCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGAACGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAGAAGCTGAAGAACTACCG
CTTCCCGGGCAACGTCCGCGAGCTGGAAAACATGCTGGAGCGCGCCTATACCCTGTGCGAAGACGACCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCCGCGAGCCTGAGCGAAATCGACAACCTCGAGGAC
TACCTGGAAGACATCGAGCGCAAGCTGATCATGCAGGCACTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGCTCGATGCGCTACCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

3D structure

• AlphaFold DB: A0A0H2ZG94

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	100	100	1
pilR	Acinetobacter baumannii strain A118	51.198	100	0.528
luxO	Vibrio cholerae strain A1552	38.17	100	0.384