Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   ABKA15_RS03250 Genome accession   NZ_CP157941
Coordinates   660405..661409 (+) Length   334 a.a.
NCBI ID   WP_049514346.1    Uniprot ID   A0A7L8W6N1
Organism   Streptococcus sp. KHUD_010     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 655405..666409
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKA15_RS03240 (ABKA15_03235) - 655420..658866 (+) 3447 Protein_627 GBS Bsp-like repeat-containing protein -
  ABKA15_RS03245 (ABKA15_03240) - 659059..660141 (-) 1083 WP_264340923.1 Xaa-Pro peptidase family protein -
  ABKA15_RS03250 (ABKA15_03245) ccpA 660405..661409 (+) 1005 WP_049514346.1 catabolite control protein A Regulator
  ABKA15_RS03255 (ABKA15_03250) - 661741..662739 (+) 999 WP_106388373.1 glycosyltransferase -
  ABKA15_RS03260 (ABKA15_03255) - 662741..664054 (+) 1314 WP_106388374.1 glycosyltransferase family 4 protein -
  ABKA15_RS03265 (ABKA15_03260) - 664081..664422 (+) 342 WP_106388375.1 hypothetical protein -
  ABKA15_RS03270 (ABKA15_03265) micA 664706..665407 (+) 702 WP_049513494.1 response regulator YycF Regulator

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37046.10 Da        Isoelectric Point: 5.8267

>NTDB_id=1009108 ABKA15_RS03250 WP_049514346.1 660405..661409(+) (ccpA) [Streptococcus sp. KHUD_010]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATMDAVERLTKNNQKITFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERVIASK
ATAAFVTGDELAAGLLNGLSDKGVNVPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=1009108 ABKA15_RS03250 WP_049514346.1 660405..661409(+) (ccpA) [Streptococcus sp. KHUD_010]
ATGAACACAGACGATACAGTAACCATTTATGATGTCGCGCGTGAAGCGGGAGTTTCAATGGCAACCGTTAGCCGTGTGGT
AAATGGAAACAAAAATGTAAAGGAAAATACAAGAAAAAAAGTCTTGGAAGTGATTGACCGCTTGGATTACCGACCAAATG
CGGTAGCGCGTGGCTTAGCTAGCAAAAAGACGACAACTGTCGGGGTTGTCATTCCAAATATTACAAGTAGTTATTTTTCA
ACGCTTGCAAAAGGGATTGATGATATCGCAGAGATGTATAAATACAATATTGTTTTAGCAAATAGTGATGAAGATGATGA
CAAGGAAGTTTCTGTTGTCAATACGCTGTTCTCAAAACAAGTGGACGGTATTATCTTTATGGGCTATCATTTGACAGAAA
AGATTCGCTCCGAGTTTTCTCGTTCGCGGACGCCAGTTGTGCTTGCAGGCACGGTTGATGTGGAGCATCAATTACCAAGT
GTGAATATTGACTATAAGCAAGCAACCATGGATGCAGTTGAACGTCTTACAAAAAATAATCAAAAAATTACTTTTGTAAG
CGGACCTTTGGTGGATGACATCAATGGTAAGATTCGTTTAGCTGGCTACAAAGAAGCTTTGAAGAAAGCCAAACTTACTT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATACAGCTATGATGATGGTTATCAATTAGCAGAACGGGTCATTGCTTCCAAA
GCCACAGCAGCTTTTGTGACTGGTGATGAGCTGGCGGCTGGACTGTTAAATGGTTTATCAGACAAGGGTGTAAATGTACC
AGAAGATTTTGAAATCATCACTAGCGATGATTCGCAGGTAGCACGCTTCACTCGTCCAAATTTGACAACTATTGGTCAGC
CTTTGTATGACCTTGGTGCGATTAGTATGCGCATGCTGACTAAGATTATGCACAAGGAAGAGTTAGAAGAACGTGAAGTA
GTATTAGCTCATGGTCTTATTGAGCGTCGTTCAACAAGAAAGTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(182-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L8W6N1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

90.12

100

0.901
  ccpA Streptococcus pneumoniae D39

88.623

100

0.886
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.402

99.102

0.569

Multiple sequence alignment