Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   ABKA15_RS00015 Genome accession   NZ_CP157941
Coordinates   1194..2384 (-) Length   396 a.a.
NCBI ID   WP_049512719.1    Uniprot ID   A0A7L8W7E4
Organism   Streptococcus sp. KHUD_010     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1..7384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABKA15_RS00010 (ABKA15_00010) spo0J 372..1139 (-) 768 WP_350015351.1 ParB/RepB/Spo0J family partition protein Regulator
  ABKA15_RS00015 (ABKA15_00015) htrA 1194..2384 (-) 1191 WP_049512719.1 trypsin-like peptidase domain-containing protein Regulator
  ABKA15_RS00020 (ABKA15_00020) rlmH 2577..3056 (+) 480 WP_049512717.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ABKA15_RS00030 (ABKA15_00030) - 3338..3484 (+) 147 WP_003029519.1 bacteriocin -
  ABKA15_RS00035 (ABKA15_00035) comD/comD2 3541..4827 (+) 1287 WP_225620268.1 GHKL domain-containing protein Regulator
  ABKA15_RS00040 (ABKA15_00040) comE 4827..5576 (+) 750 WP_049512713.1 competence system response regulator transcription factor ComE Regulator
  ABKA15_RS00045 (ABKA15_00045) - 5683..6628 (+) 946 Protein_7 IS30 family transposase -

Sequence


Protein


Download         Length: 396 a.a.        Molecular weight: 41638.61 Da        Isoelectric Point: 9.4264

>NTDB_id=1009077 ABKA15_RS00015 WP_049512719.1 1194..2384(-) (htrA) [Streptococcus sp. KHUD_010]
MKNSSNFTKKLLLLFMVLAIGFIGGLLGNLTSSKLSTTSSTTTKVNQVTTAYKNTNSTTQAVSKVKDAVVSVITYANNNS
QNSVFGNDDSNNNNDNSQQVASEGSGVIYKKDGKYAYLVTNTHVISGAKKVDIRLADGNKVPGEIVGSDTYSDISVVRIS
ADKVKSVAEFGDSSKLTVGETAIAIGSPLGSNYANTVTQGIISSLNRNVSLKSEDGQTISTQAIQTDTAINPGNSGGPLV
NIQGQVIGITSSKIASNGGTSVEGLGFAIPSNDVINIINQLEANGTVTRPALGIQMIDITNLSSSDLSRLKLPSKITSGV
VVRSAQSGMPAEGKLQKYDVITKVDDKEISSTSDLQSALYKHSIGDNIKITFYRDGKETTTTIKLTKSTKDLDSNN

Nucleotide


Download         Length: 1191 bp        

>NTDB_id=1009077 ABKA15_RS00015 WP_049512719.1 1194..2384(-) (htrA) [Streptococcus sp. KHUD_010]
ATGAAAAACTCTTCAAATTTCACAAAAAAATTGTTATTGCTTTTCATGGTCTTAGCTATAGGTTTTATTGGTGGTTTACT
TGGAAACTTAACTTCATCTAAATTATCAACAACTAGCTCTACAACGACTAAAGTTAATCAAGTTACTACTGCTTATAAAA
ATACAAATTCCACAACACAAGCTGTGAGTAAAGTAAAAGATGCTGTTGTATCCGTTATTACCTATGCTAATAATAATTCA
CAAAACAGTGTGTTTGGAAATGATGATTCAAATAATAACAATGATAATTCTCAACAAGTAGCTAGCGAAGGATCTGGAGT
TATTTATAAAAAAGATGGAAAATACGCTTACTTAGTAACCAATACCCACGTTATCAGTGGTGCTAAAAAAGTTGACATTC
GTTTAGCAGATGGTAATAAAGTTCCTGGAGAAATTGTAGGGTCAGATACTTATTCTGATATCTCCGTTGTTCGCATTAGT
GCTGATAAAGTAAAATCAGTTGCTGAATTTGGAGATTCTAGCAAATTGACTGTTGGTGAGACAGCTATTGCAATTGGAAG
TCCACTTGGTTCAAATTATGCTAATACTGTGACTCAAGGAATTATTTCTAGTTTAAATCGTAATGTTTCTCTAAAATCTG
AAGACGGACAAACGATTTCAACACAAGCTATTCAAACAGACACAGCTATCAACCCAGGGAACTCTGGTGGACCACTTGTG
AATATCCAAGGGCAAGTAATTGGTATTACTTCAAGTAAAATAGCTAGCAACGGCGGAACTTCGGTTGAAGGATTAGGATT
TGCTATTCCATCTAATGATGTTATAAACATTATTAACCAGTTAGAAGCAAATGGAACTGTTACACGACCAGCTCTAGGAA
TCCAAATGATTGACATCACTAATCTGTCTAGTTCAGATCTATCACGCTTAAAACTTCCATCAAAAATAACTAGTGGAGTT
GTCGTGCGTTCAGCTCAATCTGGAATGCCAGCTGAAGGAAAACTTCAAAAATATGATGTGATTACAAAAGTAGATGATAA
AGAAATTTCTTCAACAAGTGATTTACAATCTGCTTTATACAAACATTCAATTGGCGACAACATAAAAATCACTTTCTATC
GTGATGGAAAAGAAACTACTACTACCATTAAGCTTACAAAATCTACAAAAGATTTAGATTCAAATAATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7L8W7E4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus gordonii str. Challis substr. CH1

75.561

100

0.765

  htrA Streptococcus mitis NCTC 12261

72.544

100

0.727

  htrA Streptococcus pneumoniae Rx1

72.292

100

0.725

  htrA Streptococcus pneumoniae D39

72.292

100

0.725

  htrA Streptococcus pneumoniae R6

72.292

100

0.725

  htrA Streptococcus pneumoniae TIGR4

72.292

100

0.725

  htrA Streptococcus mutans UA159

55.216

99.242

0.548


Multiple sequence alignment