Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ABKA15_RS00865 | Genome accession | NZ_CP157941 |
| Coordinates | 157707..160136 (+) | Length | 809 a.a. |
| NCBI ID | WP_049514299.1 | Uniprot ID | A0A7L8W337 |
| Organism | Streptococcus sp. KHUD_010 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| IScluster/Tn | 160899..161844 | 157707..160136 | flank | 763 |
Gene organization within MGE regions
Location: 157707..161844
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABKA15_RS00865 (ABKA15_00860) | clpC | 157707..160136 (+) | 2430 | WP_049514299.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| ABKA15_RS00870 (ABKA15_00865) | - | 160179..160619 (+) | 441 | WP_049514297.1 | GNAT family N-acetyltransferase | - |
| ABKA15_RS00875 (ABKA15_00870) | - | 160899..161844 (+) | 946 | Protein_171 | IS30 family transposase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89885.22 Da Isoelectric Point: 6.3652
>NTDB_id=1009083 ABKA15_RS00865 WP_049514299.1 157707..160136(+) (clpC) [Streptococcus sp. KHUD_010]
MKYSKALTESIESAQLLASHFETDYLESWQLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKIYQQEGSFTIWPF
SHRMKVLFLTAERIAEAVHAKNLGTEHVLLAMLFDRGSLAARLLEFTGFSYEDKEGVLRMTDLRKNLEHKASWGKEDIKA
IRHLNKNTAAAKQTMANMMGMPPSTSGGLEDYTHDLTEMARAGLLEPVVGRDEEISRMLQILSRKTKNNPVLVGDAGVGK
TALVLGLAQRVAAGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADGYVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKYIEKDAALSRRFAKVTIEEPTVADSIAILQGLKKSYEEHHKVVITDSAIET
AVKYAHRYLTSKHLPDSAIDLLDEAAAMVQSKGPQNHVKAELSAADEALMAGDWKKVGTLLEKESQPIVYKLKVKDEDIL
ATLSGLSGIPVQKLTQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDARFDHENMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSE
DMQEVVKIMVKPLIVSLAEKGIELKFQPSALKLLAKKGYDPEMGARPLRRTLQTQVEDHLSELLLAGELKTGQSLKVGVK
AGQLKFEVL
MKYSKALTESIESAQLLASHFETDYLESWQLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKIYQQEGSFTIWPF
SHRMKVLFLTAERIAEAVHAKNLGTEHVLLAMLFDRGSLAARLLEFTGFSYEDKEGVLRMTDLRKNLEHKASWGKEDIKA
IRHLNKNTAAAKQTMANMMGMPPSTSGGLEDYTHDLTEMARAGLLEPVVGRDEEISRMLQILSRKTKNNPVLVGDAGVGK
TALVLGLAQRVAAGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADGYVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKYIEKDAALSRRFAKVTIEEPTVADSIAILQGLKKSYEEHHKVVITDSAIET
AVKYAHRYLTSKHLPDSAIDLLDEAAAMVQSKGPQNHVKAELSAADEALMAGDWKKVGTLLEKESQPIVYKLKVKDEDIL
ATLSGLSGIPVQKLTQTDAKKYLHLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDARFDHENMEKRMMEELKKSYRPEFINRIDEKVVFHSLTSE
DMQEVVKIMVKPLIVSLAEKGIELKFQPSALKLLAKKGYDPEMGARPLRRTLQTQVEDHLSELLLAGELKTGQSLKVGVK
AGQLKFEVL
Nucleotide
Download Length: 2430 bp
>NTDB_id=1009083 ABKA15_RS00865 WP_049514299.1 157707..160136(+) (clpC) [Streptococcus sp. KHUD_010]
ATGAAATATTCAAAAGCTTTGACAGAAAGTATTGAATCAGCACAGTTATTGGCAAGTCATTTTGAAACGGATTATTTAGA
GTCTTGGCAGCTGTTGATTGCTATGGCAAATAATCCTTATAGTGTTGCTGGTTCAGTTTTAAATGATTACCCACTTGAAA
TTGATGATTTTGAGAAAGCAGCCTTTCATATCACAGGAAAGATTTATCAACAAGAGGGAAGCTTTACCATTTGGCCATTT
TCTCATCGTATGAAAGTGTTGTTTTTGACAGCTGAGCGAATTGCAGAGGCTGTGCATGCTAAGAATCTTGGGACAGAGCA
TGTGTTGTTAGCTATGCTGTTTGACAGAGGAAGTTTGGCGGCACGTCTCCTTGAATTTACAGGCTTTAGCTATGAGGATA
AAGAAGGCGTTTTGCGCATGACCGATCTTCGGAAAAACTTAGAGCATAAGGCTAGCTGGGGTAAAGAAGATATAAAGGCT
ATTCGCCACTTAAATAAAAATACTGCTGCAGCGAAACAAACGATGGCCAATATGATGGGAATGCCTCCTTCTACCAGCGG
CGGGCTAGAAGACTATACCCATGATTTAACCGAAATGGCTCGTGCTGGTCTTTTAGAACCGGTCGTTGGGCGTGATGAAG
AAATTTCGCGTATGCTTCAGATTTTAAGTCGCAAGACGAAGAATAATCCAGTGTTGGTAGGAGATGCAGGAGTTGGGAAG
ACAGCATTGGTCCTTGGTTTGGCACAGCGTGTGGCTGCTGGTCAGGTGCCAAATGAGCTTGCAAAGATGAGAGTTCTAGA
GCTGGATTTGATGAATGTGGTAGCTGGGACTCGTTTTCGCGGCGATTTTGAAGAGCGGATGAATAATATTATCAATGATA
TTGAAGCAGACGGGTACGTGATTCTCTTCATTGATGAGCTTCATACCATTATGGGTTCTGGCAGCGGGATTGATTCGACA
TTAGATGCAGCGAACATTCTCAAGCCGGCTTTGGCTAGAGGGACACTCAGAACGGTTGGCGCAACGACACAAGAAGAGTA
CCAGAAATATATTGAAAAGGATGCAGCTCTTTCACGGCGATTTGCCAAAGTTACTATTGAAGAGCCGACAGTAGCTGATA
GTATTGCGATTTTACAGGGACTCAAGAAAAGCTATGAAGAACACCACAAGGTGGTGATTACAGATTCAGCGATTGAGACA
GCTGTTAAGTATGCTCATCGTTATCTAACAAGCAAACATCTACCTGACTCGGCGATTGATTTGCTAGATGAAGCTGCTGC
AATGGTACAAAGTAAAGGTCCGCAAAATCATGTAAAAGCAGAATTGAGTGCAGCAGACGAGGCTTTAATGGCAGGCGATT
GGAAAAAAGTTGGCACTTTGTTGGAGAAAGAAAGTCAGCCAATTGTCTACAAACTAAAGGTTAAAGACGAGGATATTTTG
GCAACACTCAGCGGTTTATCGGGCATTCCTGTGCAAAAGCTGACGCAAACAGATGCGAAGAAATACCTCCATTTAGAAAA
GGAACTGCACAAACGGGTCATTGGGCAAAATGAAGCAATTTCTGCTATCAGTCGAGCGATTCGGCGCAATCAATCCGGCA
TCCGCACCAGCAAACGTCCAATTGGTTCCTTTATGTTCTTGGGTCCAACCGGGGTTGGAAAAACTGAGCTGGCTAAGGCT
TTGGCGGAAGTCCTCTTTGATGATGAGTCAGCACTGATTCGCTTTGATATGTCCGAATATATGGAGAAATTTGCTGCCAG
TCGTCTCAATGGAGCGCCTCCAGGTTATGTCGGTTATGAAGAAGGGGGCGAATTGACTGAAAAAGTTCGCAATCGTCCTT
ATTCGGTGCTCCTCTTTGACGAGGTGGAAAAAGCTCATCCTGATATTTTCAATGTGCTTCTTCAAGTCTTAGATGACGGG
GTGCTGACCGACAGCAAGGGACGTAAGGTGGATTTTTCTAATACCATTATCATTATGACCAGCAATCTTGGTGCGACAAG
TTTGCGGGACGATAAGACAGTCGGTTTTGGAGCGCGTGATGCCCGCTTTGATCATGAAAACATGGAAAAACGGATGATGG
AAGAGCTCAAGAAAAGTTATCGTCCGGAATTTATCAACCGGATTGATGAAAAGGTTGTTTTCCATAGCCTGACTAGCGAA
GACATGCAAGAAGTGGTAAAAATTATGGTGAAACCACTCATTGTCAGTCTCGCTGAAAAAGGAATTGAGCTGAAATTCCA
ACCTAGTGCTTTGAAACTTCTGGCTAAAAAAGGTTACGATCCTGAAATGGGAGCAAGGCCACTTCGCAGAACCCTACAAA
CTCAGGTGGAAGACCATTTATCAGAATTACTTTTAGCAGGTGAGCTAAAAACGGGACAAAGCTTGAAAGTCGGTGTCAAG
GCTGGGCAGCTGAAGTTTGAAGTGCTATGA
ATGAAATATTCAAAAGCTTTGACAGAAAGTATTGAATCAGCACAGTTATTGGCAAGTCATTTTGAAACGGATTATTTAGA
GTCTTGGCAGCTGTTGATTGCTATGGCAAATAATCCTTATAGTGTTGCTGGTTCAGTTTTAAATGATTACCCACTTGAAA
TTGATGATTTTGAGAAAGCAGCCTTTCATATCACAGGAAAGATTTATCAACAAGAGGGAAGCTTTACCATTTGGCCATTT
TCTCATCGTATGAAAGTGTTGTTTTTGACAGCTGAGCGAATTGCAGAGGCTGTGCATGCTAAGAATCTTGGGACAGAGCA
TGTGTTGTTAGCTATGCTGTTTGACAGAGGAAGTTTGGCGGCACGTCTCCTTGAATTTACAGGCTTTAGCTATGAGGATA
AAGAAGGCGTTTTGCGCATGACCGATCTTCGGAAAAACTTAGAGCATAAGGCTAGCTGGGGTAAAGAAGATATAAAGGCT
ATTCGCCACTTAAATAAAAATACTGCTGCAGCGAAACAAACGATGGCCAATATGATGGGAATGCCTCCTTCTACCAGCGG
CGGGCTAGAAGACTATACCCATGATTTAACCGAAATGGCTCGTGCTGGTCTTTTAGAACCGGTCGTTGGGCGTGATGAAG
AAATTTCGCGTATGCTTCAGATTTTAAGTCGCAAGACGAAGAATAATCCAGTGTTGGTAGGAGATGCAGGAGTTGGGAAG
ACAGCATTGGTCCTTGGTTTGGCACAGCGTGTGGCTGCTGGTCAGGTGCCAAATGAGCTTGCAAAGATGAGAGTTCTAGA
GCTGGATTTGATGAATGTGGTAGCTGGGACTCGTTTTCGCGGCGATTTTGAAGAGCGGATGAATAATATTATCAATGATA
TTGAAGCAGACGGGTACGTGATTCTCTTCATTGATGAGCTTCATACCATTATGGGTTCTGGCAGCGGGATTGATTCGACA
TTAGATGCAGCGAACATTCTCAAGCCGGCTTTGGCTAGAGGGACACTCAGAACGGTTGGCGCAACGACACAAGAAGAGTA
CCAGAAATATATTGAAAAGGATGCAGCTCTTTCACGGCGATTTGCCAAAGTTACTATTGAAGAGCCGACAGTAGCTGATA
GTATTGCGATTTTACAGGGACTCAAGAAAAGCTATGAAGAACACCACAAGGTGGTGATTACAGATTCAGCGATTGAGACA
GCTGTTAAGTATGCTCATCGTTATCTAACAAGCAAACATCTACCTGACTCGGCGATTGATTTGCTAGATGAAGCTGCTGC
AATGGTACAAAGTAAAGGTCCGCAAAATCATGTAAAAGCAGAATTGAGTGCAGCAGACGAGGCTTTAATGGCAGGCGATT
GGAAAAAAGTTGGCACTTTGTTGGAGAAAGAAAGTCAGCCAATTGTCTACAAACTAAAGGTTAAAGACGAGGATATTTTG
GCAACACTCAGCGGTTTATCGGGCATTCCTGTGCAAAAGCTGACGCAAACAGATGCGAAGAAATACCTCCATTTAGAAAA
GGAACTGCACAAACGGGTCATTGGGCAAAATGAAGCAATTTCTGCTATCAGTCGAGCGATTCGGCGCAATCAATCCGGCA
TCCGCACCAGCAAACGTCCAATTGGTTCCTTTATGTTCTTGGGTCCAACCGGGGTTGGAAAAACTGAGCTGGCTAAGGCT
TTGGCGGAAGTCCTCTTTGATGATGAGTCAGCACTGATTCGCTTTGATATGTCCGAATATATGGAGAAATTTGCTGCCAG
TCGTCTCAATGGAGCGCCTCCAGGTTATGTCGGTTATGAAGAAGGGGGCGAATTGACTGAAAAAGTTCGCAATCGTCCTT
ATTCGGTGCTCCTCTTTGACGAGGTGGAAAAAGCTCATCCTGATATTTTCAATGTGCTTCTTCAAGTCTTAGATGACGGG
GTGCTGACCGACAGCAAGGGACGTAAGGTGGATTTTTCTAATACCATTATCATTATGACCAGCAATCTTGGTGCGACAAG
TTTGCGGGACGATAAGACAGTCGGTTTTGGAGCGCGTGATGCCCGCTTTGATCATGAAAACATGGAAAAACGGATGATGG
AAGAGCTCAAGAAAAGTTATCGTCCGGAATTTATCAACCGGATTGATGAAAAGGTTGTTTTCCATAGCCTGACTAGCGAA
GACATGCAAGAAGTGGTAAAAATTATGGTGAAACCACTCATTGTCAGTCTCGCTGAAAAAGGAATTGAGCTGAAATTCCA
ACCTAGTGCTTTGAAACTTCTGGCTAAAAAAGGTTACGATCCTGAAATGGGAGCAAGGCCACTTCGCAGAACCCTACAAA
CTCAGGTGGAAGACCATTTATCAGAATTACTTTTAGCAGGTGAGCTAAAAACGGGACAAAGCTTGAAAGTCGGTGTCAAG
GCTGGGCAGCTGAAGTTTGAAGTGCTATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
77.682 |
100 |
0.779 |
| clpC | Streptococcus pneumoniae D39 |
77.682 |
100 |
0.779 |
| clpC | Streptococcus pneumoniae TIGR4 |
77.682 |
100 |
0.779 |
| clpC | Streptococcus mutans UA159 |
66.626 |
100 |
0.671 |
| clpC | Streptococcus thermophilus LMG 18311 |
66.093 |
100 |
0.665 |
| clpC | Streptococcus thermophilus LMD-9 |
65.971 |
100 |
0.664 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.88 |
100 |
0.512 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.583 |
99.258 |
0.443 |
| clpE | Streptococcus pneumoniae Rx1 |
47.284 |
77.379 |
0.366 |
| clpE | Streptococcus pneumoniae D39 |
47.284 |
77.379 |
0.366 |
| clpE | Streptococcus pneumoniae R6 |
47.284 |
77.379 |
0.366 |
| clpE | Streptococcus pneumoniae TIGR4 |
47.284 |
77.379 |
0.366 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
44.31 |
81.459 |
0.361 |
| clpE | Streptococcus mutans UA159 |
47.021 |
76.761 |
0.361 |