Detailed information NTG1008531

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: QCC38_RS14900
• Genome accession: NZ_CP157866
• Coordinates: 3068656..3069774 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain SCCH68:Ab991128
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3063656..3074774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QCC38_RS14890 (QCC38_014885)	-	3066772..3067464 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
QCC38_RS14895 (QCC38_014890)	pilT	3067591..3068628 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
QCC38_RS14900 (QCC38_014895)	pilU	3068656..3069774 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
QCC38_RS14905 (QCC38_014900)	fur	3069844..3070281 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
QCC38_RS14910 (QCC38_014905)	bamE	3070393..3070791 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
QCC38_RS14915 (QCC38_014910)	-	3070846..3071169 (-)	324	WP_000442587.1	RnfH family protein	-
QCC38_RS14920 (QCC38_014915)	-	3071169..3072236 (-)	1068	WP_002019572.1	hypothetical protein	-
QCC38_RS14925 (QCC38_014920)	-	3072389..3072844 (-)	456	WP_000782976.1	bacteriohemerythrin	-
QCC38_RS14930 (QCC38_014925)	-	3073097..3073945 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=1008531 QCC38_RS14900 WP_000347039.1 3068656..3069774(+) (pilU) [Acinetobacter baumannii strain SCCH68:Ab991128]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=1008531 QCC38_RS14900 WP_000347039.1 3068656..3069774(+) (pilU) [Acinetobacter baumannii strain SCCH68:Ab991128]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395