Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ABNF92_RS11585 Genome accession   NZ_CP157802
Coordinates   2530700..2531092 (-) Length   130 a.a.
NCBI ID   WP_008175635.1    Uniprot ID   G6YWX8
Organism   Marinobacter sp. MMG032     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2525700..2536092
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABNF92_RS11565 (ABNF92_11565) - 2526645..2527544 (-) 900 WP_069182281.1 protein-glutamate O-methyltransferase CheR -
  ABNF92_RS11570 (ABNF92_11570) - 2527572..2529647 (-) 2076 WP_349342214.1 methyl-accepting chemotaxis protein -
  ABNF92_RS11575 (ABNF92_11575) - 2529739..2530284 (-) 546 WP_069182279.1 chemotaxis protein CheW -
  ABNF92_RS11580 (ABNF92_11580) pilH 2530305..2530667 (-) 363 WP_008939836.1 twitching motility response regulator PilH -
  ABNF92_RS11585 (ABNF92_11585) pilG 2530700..2531092 (-) 393 WP_008175635.1 twitching motility response regulator PilG Regulator
  ABNF92_RS11590 (ABNF92_11590) gshB 2531390..2532343 (+) 954 WP_083231733.1 glutathione synthase -
  ABNF92_RS11595 (ABNF92_11595) - 2532392..2533258 (+) 867 WP_069182278.1 energy transducer TonB -
  ABNF92_RS11600 (ABNF92_11600) - 2533255..2533821 (+) 567 WP_069182277.1 YqgE/AlgH family protein -
  ABNF92_RS11605 (ABNF92_11605) ruvX 2533814..2534236 (+) 423 WP_222465636.1 Holliday junction resolvase RuvX -
  ABNF92_RS11610 (ABNF92_11610) pyrR 2534244..2534753 (+) 510 WP_222465635.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ABNF92_RS11615 (ABNF92_11615) - 2534781..2535794 (+) 1014 WP_069182274.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14595.86 Da        Isoelectric Point: 5.2241

>NTDB_id=1008373 ABNF92_RS11585 WP_008175635.1 2530700..2531092(-) (pilG) [Marinobacter sp. MMG032]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=1008373 ABNF92_RS11585 WP_008175635.1 2530700..2531092(-) (pilG) [Marinobacter sp. MMG032]
ATGGATGACAACTTCGAGAATTTGAAGATCATGGTGATCGACGACAGTAAAACCATACGTCGCACCGCAGAAACCCTTCT
GAAAAAGGTCGGCTGTGAGGTCATCACCGCGACTGACGGCTTTGACGCTCTTGCAAAGATTGCCGATTCCCAGCCGGACA
TCATTTTTGTCGATATCATGATGCCTCGCCTGGACGGCTACCAGACCTGCGCACTTATCAAGAACAATTCCTCCTTCAAA
AAGACGCCGGTTATCATGCTCTCCAGCAAGGACGGGCTGTTCGACAAGGCCAAGGGCCGGATCGTCGGCTCGGACCAGTA
TCTGACCAAGCCGTTCAGTAAGGATGAGCTACTCAATACCATCCGCCAGTATGTTCCACAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G6YWX8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

44.037

83.846

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment