Detailed information NTG1007068

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABK819_RS28795
• Genome accession: NZ_CP157460
• Coordinates: 6160290..6161354 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa isolate PA103_delta_UT+fleQ
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 6155290..6166354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABK819_RS28770 (ABK819_28745)	aroK	6155825..6156343 (-)	519	WP_003095833.1	shikimate kinase AroK	-
ABK819_RS28775 (ABK819_28750)	pilQ	6156355..6158499 (-)	2145	WP_015503770.1	type 4a pilus secretin PilQ	Machinery gene
ABK819_RS28780 (ABK819_28755)	pilP	6158553..6159077 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
ABK819_RS28785 (ABK819_28760)	pilO	6159074..6159697 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
ABK819_RS28790 (ABK819_28765)	pilN	6159694..6160290 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
ABK819_RS28795 (ABK819_28770)	pilM	6160290..6161354 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
ABK819_RS28800 (ABK819_28775)	-	6161539..6164010 (+)	2472	WP_019484455.1	penicillin-binding protein 1A	-
ABK819_RS28805 (ABK819_28780)	-	6164106..6165374 (-)	1269	WP_003095842.1	malic enzyme	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1007068 ABK819_RS28795 WP_003110888.1 6160290..6161354(-) (pilM) [Pseudomonas aeruginosa isolate PA103_delta_UT+fleQ]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1007068 ABK819_RS28795 WP_003110888.1 6160290..6161354(-) (pilM) [Pseudomonas aeruginosa isolate PA103_delta_UT+fleQ]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGACTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGTGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466