Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABLB99_RS01630 | Genome accession | NZ_CP157447 |
| Coordinates | 352603..353085 (+) | Length | 160 a.a. |
| NCBI ID | WP_004884685.1 | Uniprot ID | A0A1V0YN91 |
| Organism | Acinetobacter nosocomialis strain XH1727 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 347603..358085
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABLB99_RS01625 (ABLB99_01625) | pilY1 | 348406..352590 (+) | 4185 | WP_017392606.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ABLB99_RS01630 (ABLB99_01630) | pilY2 | 352603..353085 (+) | 483 | WP_004884685.1 | type IV pilin protein | Machinery gene |
| ABLB99_RS01635 (ABLB99_01635) | pilE | 353082..353507 (+) | 426 | WP_023188119.1 | type IV pilin protein | Machinery gene |
| ABLB99_RS01640 (ABLB99_01640) | rpsP | 353654..353905 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABLB99_RS01645 (ABLB99_01645) | rimM | 353925..354473 (+) | 549 | WP_004711694.1 | ribosome maturation factor RimM | - |
| ABLB99_RS01650 (ABLB99_01650) | trmD | 354520..355275 (+) | 756 | WP_004884678.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABLB99_RS01655 (ABLB99_01655) | rplS | 355491..355859 (+) | 369 | WP_002051668.1 | 50S ribosomal protein L19 | - |
| ABLB99_RS01660 (ABLB99_01660) | - | 355911..356852 (-) | 942 | WP_079377864.1 | triacylglycerol lipase | - |
| ABLB99_RS01665 (ABLB99_01665) | - | 356967..358001 (-) | 1035 | WP_002051740.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17498.71 Da Isoelectric Point: 9.1549
>NTDB_id=1006920 ABLB99_RS01630 WP_004884685.1 352603..353085(+) (pilY2) [Acinetobacter nosocomialis strain XH1727]
MSKYYNLKFNRGFTLIELMVTLLTLAILVAIAVPSYQSYARRATASAAKSEILKLAERLEQHKSRNFTYRGFTTTSVTLT
RGGYTIQITDDTTAGNLLTSSAANGQTWVIRATTTDSRNLNFIAKNSGLRCQSLTATAVDNDCGGTTTCNTCEANSESWQ
MSKYYNLKFNRGFTLIELMVTLLTLAILVAIAVPSYQSYARRATASAAKSEILKLAERLEQHKSRNFTYRGFTTTSVTLT
RGGYTIQITDDTTAGNLLTSSAANGQTWVIRATTTDSRNLNFIAKNSGLRCQSLTATAVDNDCGGTTTCNTCEANSESWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=1006920 ABLB99_RS01630 WP_004884685.1 352603..353085(+) (pilY2) [Acinetobacter nosocomialis strain XH1727]
ATGAGTAAATACTATAATTTGAAGTTCAATCGGGGTTTTACTCTGATTGAACTTATGGTCACTCTTCTTACTTTAGCTAT
TCTTGTTGCTATTGCTGTTCCTTCTTATCAAAGTTATGCCCGTAGAGCTACCGCATCTGCCGCTAAGAGTGAGATTTTAA
AATTAGCTGAGCGATTGGAGCAGCATAAGTCTAGAAATTTTACCTATAGGGGATTTACCACAACCTCTGTAACGTTAACT
CGTGGGGGGTATACGATTCAGATCACTGATGATACGACTGCTGGTAATTTATTAACGAGTTCTGCTGCTAATGGGCAGAC
ATGGGTGATTAGAGCGACTACTACAGATTCCAGAAATCTTAATTTTATTGCTAAAAACTCAGGTTTACGTTGCCAGAGCT
TAACAGCTACTGCTGTTGATAATGATTGTGGTGGAACAACTACATGTAACACATGTGAAGCAAATAGTGAGAGTTGGCAG
TGA
ATGAGTAAATACTATAATTTGAAGTTCAATCGGGGTTTTACTCTGATTGAACTTATGGTCACTCTTCTTACTTTAGCTAT
TCTTGTTGCTATTGCTGTTCCTTCTTATCAAAGTTATGCCCGTAGAGCTACCGCATCTGCCGCTAAGAGTGAGATTTTAA
AATTAGCTGAGCGATTGGAGCAGCATAAGTCTAGAAATTTTACCTATAGGGGATTTACCACAACCTCTGTAACGTTAACT
CGTGGGGGGTATACGATTCAGATCACTGATGATACGACTGCTGGTAATTTATTAACGAGTTCTGCTGCTAATGGGCAGAC
ATGGGTGATTAGAGCGACTACTACAGATTCCAGAAATCTTAATTTTATTGCTAAAAACTCAGGTTTACGTTGCCAGAGCT
TAACAGCTACTGCTGTTGATAATGATTGTGGTGGAACAACTACATGTAACACATGTGAAGCAAATAGTGAGAGTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
83.75 |
100 |
0.838 |
| comE | Acinetobacter baylyi ADP1 |
37.209 |
100 |
0.4 |