Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | UXQ45_RS11015 | Genome accession | NZ_CP157420 |
| Coordinates | 2172514..2172984 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain BSN48-2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2142195..2194383 | 2172514..2172984 | within | 0 |
Gene organization within MGE regions
Location: 2142195..2194383
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UXQ45_RS10800 (UXQ45_010800) | scn | 2142195..2142545 (-) | 351 | WP_000702262.1 | complement inhibitor SCIN-A | - |
| UXQ45_RS10805 (UXQ45_010805) | - | 2143228..2143678 (+) | 451 | Protein_2095 | chemotaxis-inhibiting protein CHIPS | - |
| UXQ45_RS10810 (UXQ45_010810) | - | 2143773..2144107 (-) | 335 | Protein_2096 | SH3 domain-containing protein | - |
| UXQ45_RS10815 (UXQ45_010815) | sak | 2144754..2145245 (-) | 492 | WP_000920042.1 | staphylokinase | - |
| UXQ45_RS10820 (UXQ45_010820) | - | 2145436..2146191 (-) | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| UXQ45_RS10825 (UXQ45_010825) | - | 2146203..2146457 (-) | 255 | WP_000611512.1 | phage holin | - |
| UXQ45_RS10830 (UXQ45_010830) | - | 2146509..2146616 (+) | 108 | WP_031762631.1 | hypothetical protein | - |
| UXQ45_RS10835 (UXQ45_010835) | pepG1 | 2146669..2146803 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| UXQ45_RS10840 (UXQ45_010840) | sep | 2147048..2147830 (-) | 783 | WP_000034846.1 | staphylococcal enterotoxin type P | - |
| UXQ45_RS10845 (UXQ45_010845) | - | 2148242..2148616 (-) | 375 | WP_000340977.1 | hypothetical protein | - |
| UXQ45_RS10850 (UXQ45_010850) | - | 2148672..2148959 (-) | 288 | WP_001262621.1 | hypothetical protein | - |
| UXQ45_RS10855 (UXQ45_010855) | - | 2149005..2149157 (-) | 153 | WP_001000058.1 | hypothetical protein | - |
| UXQ45_RS10860 (UXQ45_010860) | - | 2149150..2152932 (-) | 3783 | WP_000582152.1 | phage tail spike protein | - |
| UXQ45_RS10865 (UXQ45_010865) | - | 2152948..2154432 (-) | 1485 | WP_000567396.1 | phage tail domain-containing protein | - |
| UXQ45_RS10870 (UXQ45_010870) | - | 2154429..2158958 (-) | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| UXQ45_RS10875 (UXQ45_010875) | - | 2159015..2159152 (-) | 138 | WP_001549167.1 | hypothetical protein | - |
| UXQ45_RS10880 (UXQ45_010880) | - | 2159203..2159553 (-) | 351 | WP_001096355.1 | hypothetical protein | - |
| UXQ45_RS10885 (UXQ45_010885) | - | 2159603..2159833 (-) | 231 | Protein_2111 | Ig-like domain-containing protein | - |
| UXQ45_RS10890 (UXQ45_010890) | - | 2159869..2160513 (-) | 645 | WP_000268740.1 | major tail protein | - |
| UXQ45_RS10895 (UXQ45_010895) | - | 2160514..2160921 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| UXQ45_RS10900 (UXQ45_010900) | - | 2160918..2161322 (-) | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| UXQ45_RS10905 (UXQ45_010905) | - | 2161319..2161681 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| UXQ45_RS10910 (UXQ45_010910) | - | 2161665..2161949 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| UXQ45_RS10915 (UXQ45_010915) | - | 2161939..2162223 (-) | 285 | WP_000238236.1 | hypothetical protein | - |
| UXQ45_RS10920 (UXQ45_010920) | - | 2162243..2163388 (-) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| UXQ45_RS10925 (UXQ45_010925) | - | 2163412..2164149 (-) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| UXQ45_RS10930 (UXQ45_010930) | - | 2164133..2165320 (-) | 1188 | WP_000025274.1 | phage portal protein | - |
| UXQ45_RS10935 (UXQ45_010935) | - | 2165336..2166997 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| UXQ45_RS10940 (UXQ45_010940) | - | 2166994..2167338 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| UXQ45_RS10945 (UXQ45_010945) | - | 2167468..2167767 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| UXQ45_RS10950 (UXQ45_010950) | - | 2167999..2168415 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| UXQ45_RS10955 (UXQ45_010955) | - | 2168443..2168643 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| UXQ45_RS10960 (UXQ45_010960) | - | 2168643..2168792 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| UXQ45_RS10965 (UXQ45_010965) | - | 2168789..2168995 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| UXQ45_RS10970 (UXQ45_010970) | - | 2168992..2169237 (-) | 246 | WP_001282071.1 | hypothetical protein | - |
| UXQ45_RS10975 (UXQ45_010975) | - | 2169274..2169810 (-) | 537 | WP_000185693.1 | dUTPase | - |
| UXQ45_RS10980 (UXQ45_010980) | - | 2169807..2170052 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| UXQ45_RS10985 (UXQ45_010985) | - | 2170067..2170315 (-) | 249 | WP_000178987.1 | SAV1978 family virulence-associated passenger protein | - |
| UXQ45_RS10990 (UXQ45_010990) | - | 2170312..2170569 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| UXQ45_RS10995 (UXQ45_010995) | - | 2170569..2170940 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| UXQ45_RS11000 (UXQ45_011000) | - | 2170953..2171357 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| UXQ45_RS11005 (UXQ45_011005) | - | 2171366..2171584 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| UXQ45_RS11010 (UXQ45_011010) | - | 2171591..2172484 (-) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| UXQ45_RS11015 (UXQ45_011015) | ssbA | 2172514..2172984 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| UXQ45_RS11020 (UXQ45_011020) | - | 2172985..2173602 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| UXQ45_RS11025 (UXQ45_011025) | - | 2173683..2174603 (-) | 921 | WP_000180600.1 | recombinase RecT | - |
| UXQ45_RS11030 (UXQ45_011030) | - | 2174605..2176548 (-) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| UXQ45_RS11035 (UXQ45_011035) | - | 2176557..2176820 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| UXQ45_RS11040 (UXQ45_011040) | - | 2176829..2177089 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| UXQ45_RS11045 (UXQ45_011045) | - | 2177094..2177396 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| UXQ45_RS11050 (UXQ45_011050) | - | 2177491..2177652 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| UXQ45_RS11055 (UXQ45_011055) | - | 2177649..2177972 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| UXQ45_RS11060 (UXQ45_011060) | - | 2178027..2178407 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| UXQ45_RS11065 (UXQ45_011065) | - | 2178394..2178591 (-) | 198 | WP_001148856.1 | hypothetical protein | - |
| UXQ45_RS11070 (UXQ45_011070) | - | 2178607..2179359 (-) | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| UXQ45_RS11075 (UXQ45_011075) | - | 2179410..2179739 (+) | 330 | WP_000128909.1 | hypothetical protein | - |
| UXQ45_RS11080 (UXQ45_011080) | - | 2179728..2179943 (-) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| UXQ45_RS11085 (UXQ45_011085) | - | 2179959..2180222 (-) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| UXQ45_RS11090 (UXQ45_011090) | - | 2180219..2180393 (-) | 175 | Protein_2152 | transcriptional regulator | - |
| UXQ45_RS11095 (UXQ45_011095) | - | 2180356..2181069 (+) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| UXQ45_RS11100 (UXQ45_011100) | - | 2181085..2182017 (+) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| UXQ45_RS11105 (UXQ45_011105) | - | 2182023..2182364 (+) | 342 | WP_000591749.1 | hypothetical protein | - |
| UXQ45_RS11110 (UXQ45_011110) | - | 2182568..2182750 (+) | 183 | WP_000694772.1 | hypothetical protein | - |
| UXQ45_RS11115 (UXQ45_011115) | - | 2182850..2183833 (+) | 984 | WP_001558608.1 | glycosyltransferase family 2 protein | - |
| UXQ45_RS11120 (UXQ45_011120) | - | 2183844..2184086 (+) | 243 | WP_000427213.1 | hypothetical protein | - |
| UXQ45_RS11125 (UXQ45_011125) | - | 2184149..2185186 (+) | 1038 | WP_000857180.1 | site-specific integrase | - |
| UXQ45_RS11130 (UXQ45_011130) | sph | 2185237..2186067 (+) | 831 | Protein_2160 | sphingomyelin phosphodiesterase | - |
| UXQ45_RS11135 (UXQ45_011135) | lukG | 2186305..2187321 (-) | 1017 | WP_000595396.1 | bi-component leukocidin LukGH subunit G | - |
| UXQ45_RS11140 (UXQ45_011140) | lukH | 2187343..2188398 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| UXQ45_RS11145 (UXQ45_011145) | - | 2188834..2190057 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| UXQ45_RS11150 (UXQ45_011150) | - | 2190560..2191867 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| UXQ45_RS11155 (UXQ45_011155) | groL | 2192407..2194023 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| UXQ45_RS11160 (UXQ45_011160) | groES | 2194099..2194383 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1006735 UXQ45_RS11015 WP_000934759.1 2172514..2172984(-) (ssbA) [Staphylococcus aureus strain BSN48-2]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1006735 UXQ45_RS11015 WP_000934759.1 2172514..2172984(-) (ssbA) [Staphylococcus aureus strain BSN48-2]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |