Detailed information NTG1005729

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: FGL18_RS00360
• Genome accession: NZ_LR594046
• Coordinates: 57304..58302 (+)
• Length: 332 a.a.
• NCBI ID: WP_129555156.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae strain NCTC6403
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 52304..63302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL18_RS00340 (NCTC6403_00068)	-	53232..54488 (+)	1257	WP_138124354.1	DUF4041 domain-containing protein	-
FGL18_RS00345	-	54481..54690 (+)	210	WP_138124357.1	hypothetical protein	-
FGL18_RS00350 (NCTC6403_00069)	purB	54739..56031 (+)	1293	WP_138124360.1	adenylosuccinate lyase	-
FGL18_RS00355 (NCTC6403_00070)	comR	56173..57084 (+)	912	WP_138124363.1	XRE family transcriptional regulator	Regulator
FGL18_RS10800 (NCTC6403_00071)	comS	57172..57270 (+)	99	WP_014611913.1	quorum-sensing system DWW-type pheromone	Regulator
FGL18_RS00360 (NCTC6403_00072)	ruvB	57304..58302 (+)	999	WP_129555156.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
FGL18_RS00365 (NCTC6403_00073)	-	58437..58868 (+)	432	WP_111714695.1	low molecular weight protein-tyrosine-phosphatase	-
FGL18_RS00370 (NCTC6403_00074)	-	58897..59298 (+)	402	WP_003049089.1	MORN repeat-containing protein	-
FGL18_RS00375 (NCTC6403_00075)	-	59295..61070 (+)	1776	WP_138124366.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37250.62 Da
• Isoelectric Point: 4.5106

>NTDB_id=1005729 FGL18_RS00360 WP_129555156.1 57304..58302(+) (ruvB) [Streptococcus dysgalactiae strain NCTC6403]
MARILDNDVMGDEELVERTLRPQYLREYIGQDKVKEQLTIFIEAAKLRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGAGDTSRSVHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEADLTEIVERTADIFDMEIVHEAAQELACRSRGTPRIANRLLKRVRDYAQIVGDGVIT
AQITDKALTMLDVDREGLDYVDQKILRTMIEMYQGGPVGLGTLSVNIAEERDTVEDMYEPYLIQKGFLMRTRTGRVATEK
AYRHLGYSYPSN

Nucleotide

• Length: 999 bp

>NTDB_id=1005729 FGL18_RS00360 WP_129555156.1 57304..58302(+) (ruvB) [Streptococcus dysgalactiae strain NCTC6403]
ATGGCTAGAATTTTAGATAATGATGTAATGGGGGATGAAGAGCTTGTTGAGCGAACGCTTCGTCCGCAGTATTTACGTGA
GTACATTGGGCAAGATAAGGTTAAGGAACAATTAACCATTTTTATTGAAGCGGCTAAGCTCCGTGATGAATCTTTAGATC
ATGTGTTGTTGTTTGGCCCCCCAGGTTTAGGGAAAACCACAATGGCATTTGTGATTGCTAATGAATTAGGGGTTAACTTG
AAGCAAACTTCAGGACCAGCGATTGAGAAGGCTGGTGATTTGGTAGCTATTTTGAATGATCTGGAACCAGGAGATGTGCT
CTTTATTGATGAAATTCATCGTCTGCCTATGGCAGTCGAAGAAGTATTGTACAGTGCTATGGAAGATTTTTACATCGACA
TTATGATTGGTGCTGGGGACACTAGTCGAAGTGTTCATTTGGATTTGCCACCTTTTACATTGATTGGAGCTACAACGCGA
GCTGGGATGTTATCAAATCCTTTGCGAGCTCGATTTGGCATTACTGGACACATGGAGTATTATCAGGAAGCTGATTTGAC
TGAAATTGTCGAACGAACAGCCGATATTTTTGACATGGAAATTGTTCACGAAGCGGCTCAAGAGTTAGCTTGCCGTAGTC
GGGGAACACCGCGTATTGCTAATAGATTGTTAAAGCGGGTACGTGATTATGCTCAGATTGTTGGAGATGGCGTCATTACG
GCTCAGATTACAGATAAAGCCCTAACCATGCTTGATGTTGACCGAGAAGGTCTTGATTATGTAGATCAGAAGATTTTACG
CACCATGATTGAAATGTATCAGGGTGGACCTGTTGGCTTAGGCACTTTATCAGTTAATATTGCAGAAGAACGTGATACAG
TTGAAGACATGTACGAACCTTATCTGATTCAAAAAGGATTTCTAATGCGTACACGAACTGGTCGTGTGGCTACGGAAAAA
GCCTATCGTCATCTTGGTTATTCATATCCGTCTAACTAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	90.274	99.096	0.895
ruvB	Streptococcus pneumoniae R6	89.97	99.096	0.892
ruvB	Streptococcus pneumoniae D39	89.97	99.096	0.892
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.061	98.795	0.593
ruvB	Helicobacter pylori 26695	50.774	97.289	0.494
ruvB	Synechocystis sp. PCC 6803	50	95.783	0.479