Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | FGL14_RS09525 | Genome accession | NZ_LR594045 |
| Coordinates | 1884976..1885467 (-) | Length | 163 a.a. |
| NCBI ID | WP_002983122.1 | Uniprot ID | A0ABU0A417 |
| Organism | Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1879976..1890467
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL14_RS09510 (NCTC9413_01966) | - | 1882709..1883653 (+) | 945 | WP_003059456.1 | magnesium transporter CorA family protein | - |
| FGL14_RS09515 (NCTC9413_01967) | - | 1883785..1884441 (+) | 657 | WP_003059462.1 | DUF1129 domain-containing protein | - |
| FGL14_RS09520 (NCTC9413_01968) | rpsR | 1884572..1884811 (-) | 240 | WP_002983142.1 | 30S ribosomal protein S18 | - |
| FGL14_RS09525 (NCTC9413_01969) | ssb | 1884976..1885467 (-) | 492 | WP_002983122.1 | single-stranded DNA-binding protein | Machinery gene |
| FGL14_RS09530 (NCTC9413_01970) | rpsF | 1885489..1885779 (-) | 291 | WP_138084030.1 | 30S ribosomal protein S6 | - |
| FGL14_RS09535 (NCTC9413_01971) | - | 1886739..1887032 (-) | 294 | WP_015058032.1 | hypothetical protein | - |
| FGL14_RS09540 (NCTC9413_01972) | mutY | 1887198..1888364 (+) | 1167 | WP_138084031.1 | A/G-specific adenine glycosylase | - |
| FGL14_RS09545 (NCTC9413_01973) | trxA | 1888415..1888729 (-) | 315 | WP_003052691.1 | thioredoxin | - |
| FGL14_RS09550 (NCTC9413_01974) | - | 1888956..1890261 (+) | 1306 | Protein_1798 | FAD-containing oxidoreductase | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17981.76 Da Isoelectric Point: 4.8894
>NTDB_id=1005705 FGL14_RS09525 WP_002983122.1 1884976..1885467(-) (ssb) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFINCVIWRQPAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1005705 FGL14_RS09525 WP_002983122.1 1884976..1885467(-) (ssb) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC9413]
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
ATGATTAATAATGTAGTACTAGTTGGTCGTATGACCAAGGATGCAGAACTTCGTTACACACCAAGTCAAGTAGCTGTGGC
TACCTTCACACTTGCTGTTAACCGTACCTTTAAAAGCCAAAATGGTGAACGCGAGGCAGATTTCATTAACTGTGTGATCT
GGCGTCAACCGGCTGAAAATTTAGCGAACTGGGCTAAAAAAGGTGCTTTGATCGGAGTTACGGGTCGTATTCAGACACGT
AACTACGAAAACCAACAAGGACAACGTGTCTATGTAACAGAAGTTGTTGCAGATAATTTCCAAATGTTGGAAAGTCGTGC
TACACGTGAAGGTGGCTCAACTGGCTCATTTAATGGTGGTTTTAACAATAACACTTCATCATCAAACAGTTACTCAGCGC
CTGCACAACAAACGCCTAACTTTGGAAGAGATGATAGCCCATTTGGGAACTCAAACCCGATGGATATCTCAGATGACGAT
CTTCCATTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.632 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
59.195 |
100 |
0.632 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.547 |
65.031 |
0.374 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
54.128 |
66.871 |
0.362 |