Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | UXQ90_RS01550 | Genome accession | NZ_CP157300 |
| Coordinates | 355148..355651 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain BSN81 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 351088..375318 | 355148..355651 | within | 0 |
Gene organization within MGE regions
Location: 351088..375318
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UXQ90_RS01520 (UXQ90_01520) | - | 351088..351933 (+) | 846 | WP_001573568.1 | ParB/RepB/Spo0J family partition protein | - |
| UXQ90_RS01525 (UXQ90_01525) | - | 352087..352968 (+) | 882 | WP_000373076.1 | mechanosensitive ion channel family protein | - |
| UXQ90_RS01530 (UXQ90_01530) | - | 352998..353201 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| UXQ90_RS01535 (UXQ90_01535) | ychF | 353213..354310 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| UXQ90_RS01540 (UXQ90_01540) | - | 354396..354587 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| UXQ90_RS01545 (UXQ90_01545) | rpsF | 354831..355127 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| UXQ90_RS01550 (UXQ90_01550) | ssbA | 355148..355651 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| UXQ90_RS01555 (UXQ90_01555) | rpsR | 355703..355945 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| UXQ90_RS01560 (UXQ90_01560) | - | 356177..356896 (-) | 720 | WP_000400841.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| UXQ90_RS01565 (UXQ90_01565) | - | 357009..358223 (-) | 1215 | WP_000270135.1 | site-specific integrase | - |
| UXQ90_RS01570 (UXQ90_01570) | - | 358384..359007 (-) | 624 | WP_000230361.1 | helix-turn-helix transcriptional regulator | - |
| UXQ90_RS01575 (UXQ90_01575) | - | 359156..359320 (+) | 165 | WP_337259397.1 | helix-turn-helix domain-containing protein | - |
| UXQ90_RS01580 (UXQ90_01580) | - | 359321..359593 (+) | 273 | WP_001138305.1 | helix-turn-helix domain-containing protein | - |
| UXQ90_RS01585 (UXQ90_01585) | - | 359605..359778 (+) | 174 | WP_000784892.1 | hypothetical protein | - |
| UXQ90_RS01590 (UXQ90_01590) | - | 359745..359948 (+) | 204 | WP_001231376.1 | hypothetical protein | - |
| UXQ90_RS01595 (UXQ90_01595) | - | 359950..360333 (+) | 384 | WP_000403837.1 | hypothetical protein | - |
| UXQ90_RS01600 (UXQ90_01600) | - | 360334..360660 (+) | 327 | WP_001103967.1 | DUF1474 family protein | - |
| UXQ90_RS01605 (UXQ90_01605) | - | 360725..361594 (+) | 870 | WP_001002709.1 | primase alpha helix C-terminal domain-containing protein | - |
| UXQ90_RS01610 (UXQ90_01610) | - | 361608..363317 (+) | 1710 | WP_000447468.1 | DUF927 domain-containing protein | - |
| UXQ90_RS01615 (UXQ90_01615) | - | 363627..364007 (+) | 381 | WP_337259398.1 | hypothetical protein | - |
| UXQ90_RS01620 (UXQ90_01620) | - | 364004..364645 (+) | 642 | WP_001019762.1 | hypothetical protein | - |
| UXQ90_RS01625 (UXQ90_01625) | - | 365353..365697 (+) | 345 | WP_001288442.1 | hypothetical protein | - |
| UXQ90_RS01630 (UXQ90_01630) | - | 365728..366381 (+) | 654 | WP_000214170.1 | hypothetical protein | - |
| UXQ90_RS01635 (UXQ90_01635) | - | 366434..366961 (+) | 528 | WP_000771361.1 | spore coat protein | - |
| UXQ90_RS01640 (UXQ90_01640) | - | 367093..367305 (+) | 213 | WP_001656917.1 | hypothetical protein | - |
| UXQ90_RS01645 (UXQ90_01645) | - | 367302..367871 (+) | 570 | WP_031895036.1 | terminase small subunit | - |
| UXQ90_RS01650 (UXQ90_01650) | - | 367918..368001 (+) | 84 | Protein_327 | terminase small subunit | - |
| UXQ90_RS01655 (UXQ90_01655) | - | 368148..369116 (+) | 969 | WP_000801980.1 | Abi family protein | - |
| UXQ90_RS01660 (UXQ90_01660) | - | 369258..369695 (+) | 438 | WP_073392942.1 | DUF3102 domain-containing protein | - |
| UXQ90_RS01665 (UXQ90_01665) | - | 369813..370325 (+) | 513 | WP_000813311.1 | hypothetical protein | - |
| UXQ90_RS01670 (UXQ90_01670) | - | 370341..370520 (+) | 180 | WP_000797954.1 | hypothetical protein | - |
| UXQ90_RS01675 (UXQ90_01675) | - | 371284..372291 (-) | 1008 | WP_001080636.1 | Abi family protein | - |
| UXQ90_RS01680 (UXQ90_01680) | - | 372297..372955 (-) | 659 | Protein_333 | site-specific integrase | - |
| UXQ90_RS01685 (UXQ90_01685) | - | 373248..373616 (+) | 369 | WP_000849155.1 | YxeA family protein | - |
| UXQ90_RS01690 (UXQ90_01690) | - | 373797..374369 (+) | 573 | WP_000769723.1 | PepSY domain-containing protein | - |
| UXQ90_RS01695 (UXQ90_01695) | - | 374507..374770 (-) | 264 | WP_001055897.1 | helix-turn-helix transcriptional regulator | - |
| UXQ90_RS01700 (UXQ90_01700) | - | 375064..375318 (+) | 255 | WP_000466746.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=1005491 UXQ90_RS01550 WP_000934799.1 355148..355651(+) (ssbA) [Staphylococcus aureus strain BSN81]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=1005491 UXQ90_RS01550 WP_000934799.1 355148..355651(+) (ssbA) [Staphylococcus aureus strain BSN81]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCACAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |