Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABI201_RS09690 | Genome accession | NZ_CP157260 |
| Coordinates | 2065074..2065454 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 2024CK-00536 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2060074..2070454
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABI201_RS09660 (ABI201_09660) | tadA | 2060192..2060695 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| ABI201_RS09665 (ABI201_09665) | - | 2060702..2061826 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABI201_RS09670 (ABI201_09670) | ung | 2061823..2062536 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ABI201_RS09675 (ABI201_09675) | - | 2062587..2063183 (-) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| ABI201_RS09680 (ABI201_09680) | gspK | 2063414..2064373 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| ABI201_RS09685 (ABI201_09685) | xcpW | 2064373..2065074 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABI201_RS09690 (ABI201_09690) | xcpV | 2065074..2065454 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABI201_RS09695 (ABI201_09695) | - | 2065444..2065998 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABI201_RS09700 (ABI201_09700) | - | 2066008..2066616 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABI201_RS09705 (ABI201_09705) | - | 2066654..2067427 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ABI201_RS09710 (ABI201_09710) | - | 2067445..2067786 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABI201_RS09715 (ABI201_09715) | - | 2067798..2068778 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| ABI201_RS09720 (ABI201_09720) | kdsB | 2068790..2069551 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1005264 ABI201_RS09690 WP_000836911.1 2065074..2065454(-) (xcpV) [Acinetobacter baumannii strain 2024CK-00536]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1005264 ABI201_RS09690 WP_000836911.1 2065074..2065454(-) (xcpV) [Acinetobacter baumannii strain 2024CK-00536]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |