Detailed information NTG1004586

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: FGK83_RS05935
• Genome accession: NZ_LR590465
• Coordinates: 1208454..1209794 (+)
• Length: 446 a.a.
• NCBI ID: WP_138171905.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain NCTC8468
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1203454..1214794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK83_RS05920 (NCTC8468_01187)	lrp	1204518..1204997 (+)	480	WP_005653255.1	leucine-responsive transcriptional regulator Lrp	-
FGK83_RS05925 (NCTC8468_01188)	-	1204999..1207758 (+)	2760	WP_138171904.1	DNA translocase FtsK	-
FGK83_RS05930 (NCTC8468_01189)	lolA	1207776..1208393 (+)	618	WP_050847573.1	outer membrane lipoprotein chaperone LolA	-
FGK83_RS05935 (NCTC8468_01190)	rarA	1208454..1209794 (+)	1341	WP_138171905.1	replication-associated recombination protein A	Machinery gene
FGK83_RS05940 (NCTC8468_01191)	aroA	1209881..1211179 (-)	1299	WP_138171906.1	3-phosphoshikimate 1-carboxyvinyltransferase	-
FGK83_RS05945 (NCTC8468_01192)	purU	1211179..1212015 (-)	837	WP_021035301.1	formyltetrahydrofolate deformylase	-
FGK83_RS05950 (NCTC8468_01193)	-	1212086..1212490 (-)	405	WP_138171907.1	H-NS family nucleoid-associated regulatory protein	-
FGK83_RS05955 (NCTC8468_01195)	-	1212941..1214461 (+)	1521	WP_138171908.1	Na+/H+ antiporter NhaC family protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 50279.08 Da
• Isoelectric Point: 6.3312

>NTDB_id=1004586 FGK83_RS05935 WP_138171905.1 1208454..1209794(+) (rarA) [Haemophilus influenzae strain NCTC8468]
MSNLNFDFAENDFRPLAARMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHIHSMILWGPPGTGKTTLAEIIAQRINAEVER
ISAVTSGIKEIREAIDRAKQNRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELNNALLSRARVY
VLKSLTTAEIEQVLQQAVEDPERGLGKERLILEENLLQVLAEYVNGDARLALNCLELMVDMADETENGKKIDRTLLKEVL
GERQTRFDKQGDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASEDVGNADPRAMQVALAAWDCF
TRVGAYEGERAIAQAIIYLAVAPKSNAVYTAFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYSAEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK

Nucleotide

• Length: 1341 bp

>NTDB_id=1004586 FGK83_RS05935 WP_138171905.1 1208454..1209794(+) (rarA) [Haemophilus influenzae strain NCTC8468]
ATGTCTAACCTCAATTTTGATTTTGCCGAAAATGATTTTCGTCCACTGGCGGCAAGAATGCGTCCAACGAGTCTAGAACA
GTATTTTGGGCAAAGCCATTTAATTGGCGAGGGCAAACCACTGCGAAAAGCGATTCAAGCTGGACATATTCATTCAATGA
TTTTGTGGGGGCCACCAGGTACGGGGAAAACAACACTCGCAGAAATTATTGCTCAGCGTATTAATGCGGAAGTTGAACGA
ATTTCTGCGGTAACGAGTGGTATCAAAGAAATTCGTGAAGCCATTGATCGTGCAAAACAAAATCGTCTTGCAGATCGTAA
AACTATCTTATTTGTGGATGAAGTCCATCGTTTTAATAAAAGTCAGCAAGATGCATTTTTACCGCATATTGAAGACGGAA
CCGTTATTTTTATTGGGGCGACAACAGAAAACCCCTCTTTTGAGCTAAATAATGCGTTGCTTTCTCGTGCCCGAGTGTAT
GTGTTGAAATCACTCACAACGGCTGAAATTGAACAAGTTTTGCAGCAAGCTGTAGAAGATCCTGAACGAGGATTGGGTAA
AGAGCGGTTAATTTTAGAAGAGAATTTACTGCAAGTGCTTGCCGAATATGTTAATGGGGATGCGCGATTAGCCTTGAATT
GCCTTGAATTAATGGTGGATATGGCGGACGAAACGGAAAATGGAAAGAAAATTGACCGCACTTTATTAAAAGAAGTCTTA
GGCGAACGCCAAACGAGATTTGATAAACAAGGCGATCGTTTCTATGATTTAATTTCTGCGCTACATAAATCTGTCCGAGG
TTCTGCTCCAGATGCTGCGCTGTATTGGTATGCAAGAATTTTAACGGCAGGTGGCGATCCTCTATATGTCGCGCGTCGAT
TACTTGCCATTGCTTCAGAAGATGTGGGAAATGCAGATCCTCGTGCTATGCAAGTTGCATTGGCTGCTTGGGATTGCTTT
ACTCGAGTGGGGGCTTATGAAGGGGAGCGTGCCATTGCCCAAGCCATCATTTATCTTGCGGTTGCTCCAAAAAGTAATGC
AGTTTATACGGCGTTTAATACTGCAAAACAGCAAGCGAAAGATTTACCCGATTACGATGTTCCCCCACATTTACGCAATG
CGCCGACTAATTTAATGAAAGAGCTTGGCTATAGTGCTGAATATCGTTATGCCCACGATGAACCTAACGCTTATGCGGCA
GGCGAAAATTATTTCCCACCTGAATTAAAAGATACTCAATATTATTTTCCAACAAATAGAGGTATGGAAATTCAGATTAA
GGAAAAACTAGAACGATTACGTGAGCAAGATAAAAGTGCGGTAAAAAAACGGTATAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (188-266)

• MgsA AAA+ ATPase C terminal (MgsA_C) (267-433)

• ATPase family associated with various cellular activities (AAA) (AAA) (53-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	39.243	94.843	0.372