Detailed information NTG1004226

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABH625_RS26250
• Genome accession: NZ_CP157087
• Coordinates: 5688766..5689830 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa isolate PAO1F_delta_fleQ
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5683766..5694830

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH625_RS26225 (ABH625_26225)	aroK	5684301..5684819 (-)	519	WP_003095833.1	shikimate kinase AroK	-
ABH625_RS26230 (ABH625_26230)	pilQ	5684831..5686975 (-)	2145	WP_003114575.1	type 4a pilus secretin PilQ	Machinery gene
ABH625_RS26235 (ABH625_26235)	pilP	5687029..5687553 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
ABH625_RS26240 (ABH625_26240)	pilO	5687550..5688173 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
ABH625_RS26245 (ABH625_26245)	pilN	5688170..5688766 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
ABH625_RS26250 (ABH625_26250)	pilM	5688766..5689830 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
ABH625_RS26255 (ABH625_26255)	-	5690015..5692483 (+)	2469	WP_003114576.1	penicillin-binding protein 1A	-
ABH625_RS26260 (ABH625_26260)	-	5692588..5693856 (-)	1269	WP_003103278.1	malic enzyme	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1004226 ABH625_RS26250 WP_003110888.1 5688766..5689830(-) (pilM) [Pseudomonas aeruginosa isolate PAO1F_delta_fleQ]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1004226 ABH625_RS26250 WP_003110888.1 5688766..5689830(-) (pilM) [Pseudomonas aeruginosa isolate PAO1F_delta_fleQ]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGCTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAAAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466