Detailed information NTG1004156

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ABH616_RS26285
• Genome accession: NZ_CP157085
• Coordinates: 5696403..5697467 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa isolate mPAO1:PA4308
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5691403..5702467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABH616_RS26260 (ABH616_26260)	aroK	5691938..5692456 (-)	519	WP_003095833.1	shikimate kinase AroK	-
ABH616_RS26265 (ABH616_26265)	pilQ	5692468..5694612 (-)	2145	WP_003114575.1	type 4a pilus secretin PilQ	Machinery gene
ABH616_RS26270 (ABH616_26270)	pilP	5694666..5695190 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
ABH616_RS26275 (ABH616_26275)	pilO	5695187..5695810 (-)	624	WP_003103268.1	type 4a pilus biogenesis protein PilO	-
ABH616_RS26280 (ABH616_26280)	pilN	5695807..5696403 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
ABH616_RS26285 (ABH616_26285)	pilM	5696403..5697467 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
ABH616_RS26290 (ABH616_26290)	-	5697652..5700120 (+)	2469	WP_003114576.1	penicillin-binding protein 1A	-
ABH616_RS26295 (ABH616_26295)	-	5700225..5701493 (-)	1269	WP_003103278.1	malic enzyme	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1004156 ABH616_RS26285 WP_003110888.1 5696403..5697467(-) (pilM) [Pseudomonas aeruginosa isolate mPAO1:PA4308]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1004156 ABH616_RS26285 WP_003110888.1 5696403..5697467(-) (pilM) [Pseudomonas aeruginosa isolate mPAO1:PA4308]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGGCTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAAAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCCTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGCTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGCGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466