Detailed information NTG1002812

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF87_RS08520
• Genome accession: NZ_CP156789
• Coordinates: 1715644..1716822 (-)
• Length: 392 a.a.
• NCBI ID: WP_034588275.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7919
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1710644..1721822

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF87_RS08500 (ABEF87_08500)	-	1711177..1712205 (+)	1029	WP_034588270.1	AraC family transcriptional regulator	-
ABEF87_RS08505 (ABEF87_08505)	gcvH	1712278..1712652 (+)	375	WP_034588271.1	glycine cleavage system protein GcvH	-
ABEF87_RS08510 (ABEF87_08510)	-	1712889..1714082 (+)	1194	WP_034588273.1	MFS transporter	-
ABEF87_RS08515 (ABEF87_08515)	pilU	1714133..1715338 (-)	1206	WP_347455160.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF87_RS08520 (ABEF87_08520)	pilU	1715644..1716822 (-)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF87_RS08525 (ABEF87_08525)	-	1717035..1718084 (-)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF87_RS08530 (ABEF87_08530)	-	1718857..1719966 (-)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
ABEF87_RS08535 (ABEF87_08535)	-	1720089..1721645 (+)	1557	WP_034588284.1	phospholipase D family protein	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44232.69 Da
• Isoelectric Point: 6.1884

>NTDB_id=1002812 ABEF87_RS08520 WP_034588275.1 1715644..1716822(-) (pilU) [Acinetobacter thermotolerans strain ANC 7919]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADYPPSIKQQGLMKPFGQQKLTADKTKLFAYSLMNQRQIQEFESIMEC
NFSMSVPDVARFRVNVFQQQHNVGMVIRSVSTDIPSFEQLGLPYSLKKVIMEKRGLVLIVGATGVGKSTTLAAMLDHRNA
NTEGHIITVEDPVEYVYQHKKSMITQREIGVDCVSWHNALLNAMRQAPDVIAIGEIRDTESMEHAIAFAETGHLCVATLH
SSNADQALDRIINFFPEERRNQLLLDLSANLKAVISQRLIRTEDGKGRRAAVELLLNTPLVSDYIRKGELYELKGIMQKS
REQGMQTFDQALFDLYNDGLISYEEALCNADSSNELRLQIKLKSGRINPALQEEGGNMTILEQSKETLLSRS

Nucleotide

• Length: 1179 bp

>NTDB_id=1002812 ABEF87_RS08520 WP_034588275.1 1715644..1716822(-) (pilU) [Acinetobacter thermotolerans strain ANC 7919]
ATGTATACTCCTGAACTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTCACTAAAGTGGTGGAATATGGCGGCTC
AGACCTATTTATTACTGCAGATTACCCACCGAGTATTAAACAGCAAGGGCTGATGAAGCCTTTTGGTCAGCAGAAACTCA
CGGCAGATAAAACCAAATTGTTTGCTTATTCTTTAATGAACCAGCGTCAGATTCAGGAATTTGAATCCATTATGGAATGC
AATTTCAGCATGAGTGTACCTGATGTTGCCCGTTTCCGCGTCAATGTTTTTCAGCAACAGCATAACGTCGGTATGGTCAT
CCGAAGTGTCAGCACAGATATTCCAAGCTTTGAGCAACTTGGACTGCCATATTCGTTAAAAAAAGTGATTATGGAAAAAC
GCGGCTTAGTCCTCATTGTGGGGGCAACGGGGGTAGGTAAATCCACGACTTTGGCTGCAATGCTGGATCATCGAAATGCC
AATACTGAAGGGCATATCATTACTGTAGAAGACCCGGTGGAATATGTTTATCAGCATAAAAAATCCATGATTACCCAGCG
TGAGATTGGGGTGGATTGTGTGTCCTGGCATAATGCCTTGCTGAATGCCATGCGTCAGGCACCAGATGTAATTGCTATTG
GTGAAATCCGCGATACTGAGAGTATGGAGCATGCGATTGCTTTTGCTGAAACCGGACATCTGTGTGTAGCAACACTGCAT
TCAAGTAATGCGGATCAGGCTCTAGACCGGATTATTAACTTCTTCCCGGAAGAGCGCCGGAATCAGTTATTGTTGGACTT
ATCAGCCAATCTTAAAGCGGTCATTTCACAACGTCTGATTCGGACGGAAGATGGTAAAGGCCGCCGTGCTGCAGTAGAGT
TGTTATTAAATACGCCGCTGGTCTCAGATTATATCCGTAAGGGTGAACTTTATGAGCTGAAAGGTATTATGCAGAAATCG
CGTGAACAGGGCATGCAAACCTTTGATCAGGCACTATTTGACCTTTATAACGATGGTTTGATTTCCTATGAAGAAGCACT
GTGCAATGCGGATTCCAGTAACGAATTACGTTTGCAAATCAAATTAAAGAGCGGTCGCATCAATCCCGCCCTTCAGGAAG
AAGGTGGAAATATGACCATACTGGAACAGTCTAAAGAAACGTTACTATCAAGAAGTTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (52-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.184	88.776	0.508
pilU	Acinetobacter baylyi ADP1	55.331	88.52	0.49
pilU	Vibrio cholerae strain A1552	51.261	91.071	0.467
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.647	86.735	0.37