Detailed information NTG1002651

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ABEF85_RS13810
• Genome accession: NZ_CP156776
• Coordinates: 2832556..2833416 (+)
• Length: 286 a.a.
• NCBI ID: WP_347456716.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7955
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2827556..2838416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF85_RS13790 (ABEF85_13790)	secG	2828168..2828497 (-)	330	WP_347453474.1	preprotein translocase subunit SecG	-
ABEF85_RS13795 (ABEF85_13795)	tpiA	2828511..2829302 (-)	792	WP_347453473.1	triose-phosphate isomerase	-
ABEF85_RS13800 (ABEF85_13800)	pilB	2829586..2831295 (+)	1710	WP_347453472.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ABEF85_RS13805 (ABEF85_13805)	pilC	2831327..2832556 (+)	1230	WP_347456717.1	type II secretion system F family protein	Machinery gene
ABEF85_RS13810 (ABEF85_13810)	pilD	2832556..2833416 (+)	861	WP_347456716.1	A24 family peptidase	Machinery gene
ABEF85_RS13815 (ABEF85_13815)	coaE	2833418..2834017 (+)	600	WP_347453469.1	dephospho-CoA kinase	-
ABEF85_RS13820 (ABEF85_13820)	-	2834042..2834962 (-)	921	WP_347453468.1	DMT family transporter	-
ABEF85_RS13825 (ABEF85_13825)	rlmB	2834999..2835748 (-)	750	WP_347453467.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
ABEF85_RS13830 (ABEF85_13830)	-	2835901..2836224 (-)	324	WP_034587531.1	pyrimidine/purine nucleoside phosphorylase	-
ABEF85_RS13835 (ABEF85_13835)	recN	2836638..2838299 (+)	1662	WP_347453466.1	DNA repair protein RecN	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 31987.31 Da
• Isoelectric Point: 8.0584

>NTDB_id=1002651 ABEF85_RS13810 WP_347456716.1 2832556..2833416(+) (pilD) [Acinetobacter thermotolerans strain ANC 7955]
MQEFILYFTQNPTALYIAVGLFSLCIGSFLNVVIYRTPKMMEQEWRTDCQLFLHPDQPIIDESKITLSKPASTCPKCQTP
IRWYQNIPLISWLALRGKCGSCHNPISIRYPFIEILTAVCALIVVAVFGPTIQMLFGLVLTYVLIALTFIDFDTQLLPDR
FTLPLAALGLGINSYSIYTSPSSAIWGYIIGFLCLWVVYYLFKIVTGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
VGAIIGIILLKVRKENLPFAFGPYIAIAGWIAFLWGEQIMKAYLGQ

Nucleotide

• Length: 861 bp

>NTDB_id=1002651 ABEF85_RS13810 WP_347456716.1 2832556..2833416(+) (pilD) [Acinetobacter thermotolerans strain ANC 7955]
ATGCAAGAATTTATTTTATATTTCACACAAAACCCGACTGCGCTCTATATCGCAGTCGGGCTTTTTAGCCTCTGTATCGG
CAGTTTTCTAAATGTAGTGATTTACCGCACGCCGAAAATGATGGAACAAGAATGGAGAACAGACTGCCAGCTGTTTTTAC
ACCCAGATCAGCCGATCATTGATGAAAGCAAAATTACTCTCAGCAAACCAGCATCCACTTGTCCGAAATGCCAGACGCCA
ATTCGATGGTATCAGAATATTCCCTTGATCAGTTGGCTGGCACTGCGTGGTAAATGTGGCTCCTGCCATAATCCAATCAG
TATCCGATATCCATTTATTGAGATTCTGACTGCAGTCTGTGCGCTTATTGTTGTGGCTGTGTTCGGTCCAACAATACAGA
TGCTGTTTGGTCTAGTGCTAACTTATGTCCTGATTGCACTCACCTTTATCGACTTCGATACACAGCTCCTACCAGATCGC
TTTACCCTGCCACTCGCTGCACTGGGTCTAGGAATTAATAGCTACAGTATTTATACCTCACCCTCTTCGGCGATCTGGGG
TTATATCATTGGCTTTCTATGCCTTTGGGTAGTGTATTACCTGTTTAAAATCGTGACCGGCAAGGAAGGAATGGGCTATG
GCGACTTCAAATTACTGGCTGCGCTAGGGGCCTGGATGGGCCCACTGATGCTGCCGCTGATCGTATTACTATCCTCACTA
GTCGGTGCCATTATCGGCATCATCCTATTGAAAGTCCGCAAAGAAAACCTGCCTTTTGCCTTTGGCCCTTATATTGCCAT
TGCTGGCTGGATTGCGTTCCTTTGGGGTGAACAGATTATGAAAGCATATTTGGGTCAATAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-127)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	82.105	99.65	0.818
pilD	Acinetobacter baumannii D1279779	81.754	99.65	0.815
pilD	Vibrio cholerae strain A1552	55.805	93.357	0.521
pilD	Vibrio campbellii strain DS40M4	50.896	97.552	0.497
pilD	Neisseria gonorrhoeae MS11	46.715	95.804	0.448