Detailed information NTG1002604

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ABEF80_RS07090
• Genome accession: NZ_CP156772
• Coordinates: 1443123..1444301 (+)
• Length: 392 a.a.
• NCBI ID: WP_034588275.1
• Uniprot ID: -
• Organism: Acinetobacter thermotolerans strain ANC 7970
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1438123..1449301

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABEF80_RS07075 (ABEF80_07075)	-	1438300..1439856 (-)	1557	WP_034588284.1	phospholipase D family protein	-
ABEF80_RS07080 (ABEF80_07080)	-	1439979..1441088 (+)	1110	WP_034588280.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
ABEF80_RS07085 (ABEF80_07085)	-	1441861..1442910 (+)	1050	WP_034588278.1	3-deoxy-7-phosphoheptulonate synthase	-
ABEF80_RS07090 (ABEF80_07090)	pilU	1443123..1444301 (+)	1179	WP_034588275.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF80_RS07095 (ABEF80_07095)	pilU	1444607..1445812 (+)	1206	WP_347456828.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ABEF80_RS07100 (ABEF80_07100)	-	1445863..1447056 (-)	1194	WP_347456829.1	MFS transporter	-
ABEF80_RS07105 (ABEF80_07105)	gcvH	1447293..1447667 (-)	375	WP_034588271.1	glycine cleavage system protein GcvH	-
ABEF80_RS07110 (ABEF80_07110)	-	1447740..1448768 (-)	1029	WP_034588270.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44232.69 Da
• Isoelectric Point: 6.1884

>NTDB_id=1002604 ABEF80_RS07090 WP_034588275.1 1443123..1444301(+) (pilU) [Acinetobacter thermotolerans strain ANC 7970]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADYPPSIKQQGLMKPFGQQKLTADKTKLFAYSLMNQRQIQEFESIMEC
NFSMSVPDVARFRVNVFQQQHNVGMVIRSVSTDIPSFEQLGLPYSLKKVIMEKRGLVLIVGATGVGKSTTLAAMLDHRNA
NTEGHIITVEDPVEYVYQHKKSMITQREIGVDCVSWHNALLNAMRQAPDVIAIGEIRDTESMEHAIAFAETGHLCVATLH
SSNADQALDRIINFFPEERRNQLLLDLSANLKAVISQRLIRTEDGKGRRAAVELLLNTPLVSDYIRKGELYELKGIMQKS
REQGMQTFDQALFDLYNDGLISYEEALCNADSSNELRLQIKLKSGRINPALQEEGGNMTILEQSKETLLSRS

Nucleotide

• Length: 1179 bp

>NTDB_id=1002604 ABEF80_RS07090 WP_034588275.1 1443123..1444301(+) (pilU) [Acinetobacter thermotolerans strain ANC 7970]
ATGTATACTCCTGAACTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTCACTAAAGTGGTGGAATATGGCGGCTC
AGACCTATTTATTACTGCAGATTACCCACCGAGTATTAAACAGCAAGGGCTGATGAAGCCTTTTGGTCAGCAGAAACTCA
CGGCAGATAAAACCAAATTGTTTGCTTATTCTTTAATGAACCAGCGTCAGATTCAGGAATTTGAATCCATTATGGAATGC
AATTTCAGCATGAGTGTACCTGATGTTGCCCGTTTCCGCGTCAATGTTTTTCAGCAACAGCATAACGTCGGTATGGTCAT
CCGAAGTGTCAGCACAGATATTCCAAGCTTTGAGCAACTTGGACTGCCATATTCGTTAAAAAAAGTGATTATGGAAAAAC
GCGGCTTAGTCCTCATTGTGGGGGCAACGGGGGTAGGTAAATCCACGACTTTGGCTGCAATGCTGGATCATCGAAATGCC
AATACTGAAGGGCATATCATTACTGTAGAAGACCCGGTGGAATATGTTTATCAGCATAAAAAATCCATGATTACCCAGCG
TGAGATTGGGGTGGATTGTGTGTCCTGGCATAATGCCTTGCTGAATGCCATGCGTCAGGCACCAGATGTAATTGCTATTG
GTGAAATCCGCGATACTGAGAGTATGGAGCATGCGATTGCTTTTGCTGAAACCGGACATCTGTGTGTAGCAACACTGCAT
TCAAGTAATGCGGATCAGGCTCTAGACCGGATTATTAACTTCTTCCCGGAAGAGCGCCGGAATCAGTTATTGTTGGACTT
ATCAGCCAATCTTAAAGCGGTCATTTCACAACGTCTGATTCGGACGGAAGATGGTAAAGGCCGCCGTGCTGCAGTAGAGT
TGTTATTAAATACGCCGCTGGTCTCAGATTATATCCGTAAGGGTGAACTTTATGAGCTGAAAGGTATTATGCAGAAATCG
CGTGAACAGGGCATGCAAACCTTTGATCAGGCACTATTTGACCTTTATAACGATGGTTTGATTTCCTATGAAGAAGCACT
GTGCAATGCGGATTCCAGTAACGAATTACGTTTGCAAATCAAATTAAAGAGCGGTCGCATCAATCCCGCCCTTCAGGAAG
AAGGTGGAAATATGACCATACTGGAACAGTCTAAAGAAACGTTACTATCAAGAAGTTAG

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (52-282)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.184	88.776	0.508
pilU	Acinetobacter baylyi ADP1	55.331	88.52	0.49
pilU	Vibrio cholerae strain A1552	51.261	91.071	0.467
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.647	86.735	0.37