Detailed information NTG1002121

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABFY42_RS18190
• Genome accession: NZ_CP156682
• Coordinates: 3658317..3659480 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain B115
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3653317..3664480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFY42_RS18160 (ABFY42_18160)	-	3653582..3654001 (-)	420	WP_014419009.1	TIGR03826 family flagellar region protein	-
ABFY42_RS18165 (ABFY42_18165)	comFC	3654075..3654764 (-)	690	WP_197538213.1	ComF family protein	Machinery gene
ABFY42_RS18170 (ABFY42_18170)	-	3654770..3655054 (-)	285	WP_022553866.1	competence protein ComFB	-
ABFY42_RS18175 (ABFY42_18175)	comFA	3655112..3656497 (-)	1386	WP_022553867.1	DEAD/DEAH box helicase	Machinery gene
ABFY42_RS18180 (ABFY42_18180)	-	3656605..3657453 (-)	849	WP_003151387.1	DegV family protein	-
ABFY42_RS18185 (ABFY42_18185)	degU	3657551..3658240 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ABFY42_RS18190 (ABFY42_18190)	degS	3658317..3659480 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
ABFY42_RS18195 (ABFY42_18195)	-	3659703..3660350 (+)	648	WP_007407485.1	YigZ family protein	-
ABFY42_RS18200 (ABFY42_18200)	-	3660355..3661569 (+)	1215	WP_022553868.1	LCP family protein	-
ABFY42_RS18205 (ABFY42_18205)	-	3661669..3662745 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
ABFY42_RS18210 (ABFY42_18210)	-	3662877..3664073 (-)	1197	WP_022553869.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1002121 ABFY42_RS18190 WP_007407484.1 3658317..3659480(-) (degS) [Bacillus velezensis strain B115]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1002121 ABFY42_RS18190 WP_007407484.1 3658317..3659480(-) (degS) [Bacillus velezensis strain B115]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTTAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTAGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCTGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951