Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ABFG93_RS03735 Genome accession   NZ_CP156674
Coordinates   734300..734482 (-) Length   60 a.a.
NCBI ID   WP_347550750.1    Uniprot ID   -
Organism   Pseudalkalibacillus hwajinpoensis strain Zjut HJ2101     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 729300..739482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFG93_RS03710 (ABFG93_03710) - 730140..730886 (-) 747 WP_347550741.1 YjbA family protein -
  ABFG93_RS03715 (ABFG93_03715) fabF 731348..732586 (-) 1239 WP_347550743.1 beta-ketoacyl-ACP synthase II -
  ABFG93_RS03720 (ABFG93_03720) - 732675..733613 (-) 939 WP_347550745.1 beta-ketoacyl-ACP synthase III -
  ABFG93_RS03725 (ABFG93_03725) - 733798..734112 (+) 315 WP_347550746.1 YppG family protein -
  ABFG93_RS03730 (ABFG93_03730) - 734144..734287 (-) 144 WP_347550748.1 hypothetical protein -
  ABFG93_RS03735 (ABFG93_03735) comZ 734300..734482 (-) 183 WP_347550750.1 ComZ family protein Regulator
  ABFG93_RS03740 (ABFG93_03740) - 734522..735076 (-) 555 WP_347550752.1 DinB family protein -
  ABFG93_RS03745 (ABFG93_03745) - 735106..736014 (-) 909 WP_347550753.1 NAD(P)-dependent oxidoreductase -
  ABFG93_RS03750 (ABFG93_03750) - 736096..736506 (+) 411 WP_347550755.1 FAD-dependent oxidoreductase -
  ABFG93_RS03755 (ABFG93_03755) - 736541..737290 (+) 750 WP_347552749.1 FAD-binding oxidoreductase -
  ABFG93_RS03760 (ABFG93_03760) - 737287..738009 (-) 723 WP_347550756.1 alpha/beta hydrolase -
  ABFG93_RS03765 (ABFG93_03765) - 738319..738498 (+) 180 WP_347550758.1 YjzD family protein -
  ABFG93_RS03770 (ABFG93_03770) - 738553..738741 (-) 189 WP_347550760.1 YjzC family protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 7064.20 Da        Isoelectric Point: 4.0863

>NTDB_id=1001998 ABFG93_RS03735 WP_347550750.1 734300..734482(-) (comZ) [Pseudalkalibacillus hwajinpoensis strain Zjut HJ2101]
MNMEQNLKFMQIAMKYLPEAKQSLGEQEIELDLEKMQPLLQLFLKAMEDAYELGKQDAQE

Nucleotide


Download         Length: 183 bp        

>NTDB_id=1001998 ABFG93_RS03735 WP_347550750.1 734300..734482(-) (comZ) [Pseudalkalibacillus hwajinpoensis strain Zjut HJ2101]
ATGAACATGGAACAGAACTTGAAATTTATGCAGATTGCAATGAAGTACCTACCTGAAGCGAAACAGTCGCTTGGTGAACA
GGAGATCGAACTCGATCTCGAAAAGATGCAGCCGCTTTTACAATTATTTCTTAAGGCGATGGAAGATGCCTATGAGCTTG
GAAAGCAGGACGCACAGGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

55.932

98.333

0.55

Multiple sequence alignment