Detailed information NTG1001554

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ABFK62_RS18270
• Genome accession: NZ_CP156044
• Coordinates: 3731214..3731696 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046489.1
• Uniprot ID: A0A0J0ZLV7
• Organism: Acinetobacter baumannii strain D13
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3726214..3736696

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFK62_RS18235 (ABFK62_18235)	-	3726325..3727356 (+)	1032	WP_001189459.1	lipase secretion chaperone	-
ABFK62_RS18240 (ABFK62_18240)	-	3727471..3728412 (+)	942	WP_085916958.1	triacylglycerol lipase	-
ABFK62_RS18245 (ABFK62_18245)	rplS	3728464..3728832 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
ABFK62_RS18250 (ABFK62_18250)	trmD	3729040..3729780 (-)	741	WP_000464595.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ABFK62_RS18255 (ABFK62_18255)	rimM	3729826..3730374 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
ABFK62_RS18260 (ABFK62_18260)	rpsP	3730394..3730645 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ABFK62_RS18265 (ABFK62_18265)	pilE	3730792..3731217 (-)	426	WP_000788336.1	type IV pilin protein	Machinery gene
ABFK62_RS18270 (ABFK62_18270)	pilY2	3731214..3731696 (-)	483	WP_001046489.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
ABFK62_RS18275 (ABFK62_18275)	pilY1	3731707..3735561 (-)	3855	WP_059264959.1	VWA domain-containing protein	Machinery gene
ABFK62_RS18280 (ABFK62_18280)	pilX	3735573..3736391 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17657.94 Da
• Isoelectric Point: 8.4737

>NTDB_id=1001554 ABFK62_RS18270 WP_001046489.1 3731214..3731696(-) (pilY2) [Acinetobacter baumannii strain D13]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1001554 ABFK62_RS18270 WP_001046489.1 3731214..3731696(-) (pilY2) [Acinetobacter baumannii strain D13]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

3D structure

• AlphaFold DB: A0A0J0ZLV7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	96.25	100	0.963
comE	Acinetobacter baylyi ADP1	41.86	100	0.45