Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ABFK62_RS18265 | Genome accession | NZ_CP156044 |
| Coordinates | 3730792..3731217 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain D13 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3725792..3736217
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFK62_RS18235 (ABFK62_18235) | - | 3726325..3727356 (+) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
| ABFK62_RS18240 (ABFK62_18240) | - | 3727471..3728412 (+) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ABFK62_RS18245 (ABFK62_18245) | rplS | 3728464..3728832 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABFK62_RS18250 (ABFK62_18250) | trmD | 3729040..3729780 (-) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABFK62_RS18255 (ABFK62_18255) | rimM | 3729826..3730374 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABFK62_RS18260 (ABFK62_18260) | rpsP | 3730394..3730645 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABFK62_RS18265 (ABFK62_18265) | pilE | 3730792..3731217 (-) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| ABFK62_RS18270 (ABFK62_18270) | pilY2 | 3731214..3731696 (-) | 483 | WP_001046489.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| ABFK62_RS18275 (ABFK62_18275) | pilY1 | 3731707..3735561 (-) | 3855 | WP_059264959.1 | VWA domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=1001553 ABFK62_RS18265 WP_000788336.1 3730792..3731217(-) (pilE) [Acinetobacter baumannii strain D13]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1001553 ABFK62_RS18265 WP_000788336.1 3730792..3731217(-) (pilE) [Acinetobacter baumannii strain D13]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |