Detailed information NTG1001411

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABFV68_RS16525
• Genome accession: NZ_CP156029
• Coordinates: 3373718..3374881 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain CH1
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3368718..3379881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFV68_RS16495 (ABFV68_16495)	-	3368982..3369401 (-)	420	WP_025285352.1	TIGR03826 family flagellar region protein	-
ABFV68_RS16500 (ABFV68_16500)	comFC	3369475..3370164 (-)	690	WP_198161198.1	phosphoribosyltransferase family protein	Machinery gene
ABFV68_RS16505 (ABFV68_16505)	-	3370170..3370454 (-)	285	WP_007407481.1	competence protein ComFB	-
ABFV68_RS16510 (ABFV68_16510)	comFA	3370512..3371897 (-)	1386	WP_108725276.1	DEAD/DEAH box helicase	Machinery gene
ABFV68_RS16515 (ABFV68_16515)	-	3372006..3372854 (-)	849	WP_007407483.1	DegV family protein	-
ABFV68_RS16520 (ABFV68_16520)	degU	3372952..3373641 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ABFV68_RS16525 (ABFV68_16525)	degS	3373718..3374881 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
ABFV68_RS16530 (ABFV68_16530)	-	3375104..3375751 (+)	648	WP_007614107.1	YigZ family protein	-
ABFV68_RS16535 (ABFV68_16535)	-	3375756..3376976 (+)	1221	WP_007407486.1	LCP family protein	-
ABFV68_RS16540 (ABFV68_16540)	-	3377075..3378151 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
ABFV68_RS16545 (ABFV68_16545)	-	3378284..3379480 (-)	1197	WP_042635532.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=1001411 ABFV68_RS16525 WP_007407484.1 3373718..3374881(-) (degS) [Bacillus velezensis strain CH1]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1001411 ABFV68_RS16525 WP_007407484.1 3373718..3374881(-) (degS) [Bacillus velezensis strain CH1]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAACAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCTTTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
ATCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951