Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrG/- |
Location | 2219200..2219417 | Replicon | chromosome |
Accession | NZ_CP016852 | ||
Organism | Bacillus subtilis subsp. subtilis strain 168G |
Toxin (Protein)
Gene name | yonT | Uniprot ID | O31941 |
Locus tag | BFI33_RS11525 | Protein ID | WP_009967515.1 |
Coordinates | 2219200..2219376 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 2219317..2219417 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BFI33_RS11500 | 2214388..2214615 | - | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
BFI33_RS11505 | 2214876..2216192 | - | 1317 | WP_004399369.1 | hypothetical protein | - |
BFI33_RS11510 | 2216549..2217055 | - | 507 | WP_004399486.1 | hypothetical protein | - |
BFI33_RS11515 | 2217383..2218615 | - | 1233 | WP_004399445.1 | hypothetical protein | - |
BFI33_RS11520 | 2218697..2218885 | - | 189 | WP_004399547.1 | hypothetical protein | - |
BFI33_RS22390 | 2218930..2219181 | - | 252 | WP_010886546.1 | hypothetical protein | - |
BFI33_RS11525 | 2219200..2219376 | - | 177 | WP_009967515.1 | hypothetical protein | Toxin |
- | 2219317..2219417 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2219317..2219417 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2219317..2219417 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2219317..2219417 | + | 101 | NuclAT_2 | - | Antitoxin |
BFI33_RS11530 | 2219751..2220362 | - | 612 | WP_009967516.1 | lipoprotein | - |
BFI33_RS11535 | 2220477..2220803 | - | 327 | WP_009967517.1 | helix-turn-helix domain-containing protein | - |
BFI33_RS11540 | 2221756..2221950 | + | 195 | WP_004399291.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2151042..2285804 | 134762 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6882.45 Da Isoelectric Point: 12.8833
>T65210 WP_009967515.1 NZ_CP016852:c2219376-2219200 [Bacillus subtilis subsp. subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T65210 NZ_CP016852:c2219376-2219200 [Bacillus subtilis subsp. subtilis]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
Antitoxin
Download Length: 101 bp
>AT65210 NZ_CP016852:2219317-2219417 [Bacillus subtilis subsp. subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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