Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2392247..2392464 Replicon chromosome
Accession NZ_CP015375
Organism Bacillus subtilis subsp. subtilis strain KCTC 3135

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag AS891_RS12705 Protein ID WP_009967515.1
Coordinates 2392247..2392423 (+) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2392364..2392464 (-)

Genomic Context

AS891_RS12695AS891_RS12700AS891_RS12705AS891_RS22505AS891_RS12710AS891_RS12715AS891_RS12720AS891_RS12725AS891_RS12730AS891_RS12690------
Location: 2390820..2391146 (327 bp)
Type: Others
Protein ID: WP_009967517.1
Location: 2391261..2391872 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2392247..2392423 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2392442..2392693 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2392738..2392926 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2393008..2394240 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2394568..2395074 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2395431..2396747 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2397008..2397235 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2389673..2389867 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2392206..2392306 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2392206..2392306 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2392206..2392306 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2392206..2392306 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2392364..2392464 (101 bp)
Type: Antitoxin
Protein ID: -
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
AS891_RS126902389673..2389867-195WP_004399291.1hypothetical protein-
AS891_RS126952390820..2391146+327WP_009967517.1helix-turn-helix domain-containing protein-
AS891_RS127002391261..2391872+612WP_009967516.1lipoprotein-
-2392206..2392306-101NuclAT_2--
-2392206..2392306-101NuclAT_2--
-2392206..2392306-101NuclAT_2--
-2392206..2392306-101NuclAT_2--
AS891_RS127052392247..2392423+177WP_009967515.1hypothetical proteinToxin
-2392364..2392464-101--Antitoxin
AS891_RS225052392442..2392693+252WP_010886546.1hypothetical protein-
AS891_RS127102392738..2392926+189WP_004399547.1hypothetical protein-
AS891_RS127152393008..2394240+1233WP_004399445.1hypothetical protein-
AS891_RS127202394568..2395074+507WP_004399486.1hypothetical protein-
AS891_RS127252395431..2396747+1317WP_004399369.1hypothetical protein-
AS891_RS127302397008..2397235+228WP_004399298.1helix-turn-helix transcriptional regulator-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2325154..2460581135427


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Hok/gef cell toxic protein

(4-45)


Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T62926 WP_009967515.1 NZ_CP015375:2392247-2392423 [Bacillus subtilis subsp. subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T62926 NZ_CP015375:2392247-2392423 [Bacillus subtilis subsp. subtilis]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA

Antitoxin


Download         Length: 101 bp

>AT62926 NZ_CP015375:c2392464-2392364 [Bacillus subtilis subsp. subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References