Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2199358..2199575 Replicon chromosome
Accession NZ_CP015004
Organism Bacillus subtilis strain SZMC 6179J isolate B23

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag A3772_RS11405 Protein ID WP_009967515.1
Coordinates 2199399..2199575 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2199358..2199458 (+)

Genomic Context

------A3772_RS11420A3772_RS11380A3772_RS11385A3772_RS11390A3772_RS11395A3772_RS11400A3772_RS22260A3772_RS11405A3772_RS11410A3772_RS11415
Location: 2199358..2199458 (101 bp)
Type: Antitoxin
Protein ID: -
Location: 2199516..2199616 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2199516..2199616 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2199516..2199616 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2199516..2199616 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2201955..2202149 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2194587..2194814 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2195075..2196391 (1317 bp)
Type: Others
Protein ID: Protein_2161
Location: 2196748..2197254 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2197582..2198814 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2198896..2199084 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2199129..2199380 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2199399..2199575 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2199950..2200561 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2200676..2201002 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
A3772_RS113802194587..2194814-228WP_004399298.1helix-turn-helix transcriptional regulator-
A3772_RS113852195075..2196391-1317Protein_2161hypothetical protein-
A3772_RS113902196748..2197254-507WP_004399486.1hypothetical protein-
A3772_RS113952197582..2198814-1233WP_004399445.1hypothetical protein-
A3772_RS114002198896..2199084-189WP_004399547.1hypothetical protein-
A3772_RS222602199129..2199380-252WP_010886546.1hypothetical protein-
-2199358..2199458+101--Antitoxin
A3772_RS114052199399..2199575-177WP_009967515.1hypothetical proteinToxin
-2199516..2199616+101NuclAT_2--
-2199516..2199616+101NuclAT_2--
-2199516..2199616+101NuclAT_2--
-2199516..2199616+101NuclAT_2--
A3772_RS114102199950..2200561-612WP_009967516.1lipoprotein-
A3772_RS114152200676..2201002-327WP_009967517.1helix-turn-helix domain-containing protein-
A3772_RS114202201955..2202149+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2131241..2266023134782


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T62007 WP_009967515.1 NZ_CP015004:c2199575-2199399 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T62007 NZ_CP015004:c2199575-2199399 [Bacillus subtilis]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA

Antitoxin


Download         Length: 101 bp

>AT62007 NZ_CP015004:2199358-2199458 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References