Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-as-bsrG/-
Location 2199276..2199493 Replicon chromosome
Accession NZ_CP010314
Organism Bacillus subtilis subsp. subtilis strain 3NA isolate 1970 (Michel and Millet)

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag RP72_RS22645 Protein ID WP_009967515.1
Coordinates 2199276..2199452 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name as-bsrG
Locus tag -
Coordinates 2199393..2199493 (+)

Genomic Context

-----RP72_RS11435RP72_RS11395RP72_RS11400RP72_RS11405RP72_RS11410RP72_RS11415RP72_RS22640RP72_RS22645RP72_RS11425RP72_RS11430
Location: 2199393..2199493 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2199393..2199493 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2199393..2199493 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2199393..2199493 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2201832..2202026 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2194464..2194691 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2194952..2196268 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2196625..2197131 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2197459..2198691 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2198773..2198961 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2199006..2199257 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2199276..2199452 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2199827..2200438 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2200553..2200879 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
RP72_RS113952194464..2194691-228WP_004399298.1helix-turn-helix transcriptional regulator-
RP72_RS114002194952..2196268-1317WP_004399369.1hypothetical protein-
RP72_RS114052196625..2197131-507WP_004399486.1hypothetical protein-
RP72_RS114102197459..2198691-1233WP_004399445.1hypothetical protein-
RP72_RS114152198773..2198961-189WP_004399547.1hypothetical protein-
RP72_RS226402199006..2199257-252WP_010886546.1hypothetical protein-
RP72_RS226452199276..2199452-177WP_009967515.1hypothetical proteinToxin
-2199393..2199493+101NuclAT_2-Antitoxin
-2199393..2199493+101NuclAT_2-Antitoxin
-2199393..2199493+101NuclAT_2-Antitoxin
-2199393..2199493+101NuclAT_2-Antitoxin
RP72_RS114252199827..2200438-612WP_009967516.1lipoprotein-
RP72_RS114302200553..2200879-327WP_009967517.1helix-turn-helix domain-containing protein-
RP72_RS114352201832..2202026+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2131118..2265900134782


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T52001 WP_009967515.1 NZ_CP010314:c2199452-2199276 [Bacillus subtilis subsp. subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T52001 NZ_CP010314:c2199452-2199276 [Bacillus subtilis subsp. subtilis]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA

Antitoxin


Download         Length: 101 bp

>AT52001 NZ_CP010314:2199393-2199493 [Bacillus subtilis subsp. subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References