Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-as-bsrG/-
Location 2219544..2219761 Replicon chromosome
Accession NZ_CP010053
Organism Bacillus subtilis strain PS832

Toxin (Protein)


Gene name yonT Uniprot ID O31941
Locus tag QX56_RS21770 Protein ID WP_009967515.1
Coordinates 2219544..2219720 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name as-bsrG
Locus tag -
Coordinates 2219661..2219761 (+)

Genomic Context

-----QX56_RS10990QX56_RS10955QX56_RS10960QX56_RS10965QX56_RS10970QX56_RS10975QX56_RS21765QX56_RS21770QX56_RS10980QX56_RS10985
Location: 2219661..2219761 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2219661..2219761 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2219661..2219761 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2219661..2219761 (101 bp)
Type: Antitoxin
Protein ID: NuclAT_2
Location: 2222100..2222294 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2214732..2214959 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2215220..2216536 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2216893..2217399 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2217727..2218959 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2219041..2219229 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2219274..2219525 (252 bp)
Type: Others
Protein ID: WP_010886546.1
Location: 2219544..2219720 (177 bp)
Type: Toxin
Protein ID: WP_009967515.1
Location: 2220095..2220706 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2220821..2221147 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
QX56_RS109552214732..2214959-228WP_004399298.1helix-turn-helix transcriptional regulator-
QX56_RS109602215220..2216536-1317WP_004399369.1hypothetical protein-
QX56_RS109652216893..2217399-507WP_004399486.1hypothetical protein-
QX56_RS109702217727..2218959-1233WP_004399445.1hypothetical protein-
QX56_RS109752219041..2219229-189WP_004399547.1hypothetical protein-
QX56_RS217652219274..2219525-252WP_010886546.1hypothetical protein-
QX56_RS217702219544..2219720-177WP_009967515.1hypothetical proteinToxin
-2219661..2219761+101NuclAT_2-Antitoxin
-2219661..2219761+101NuclAT_2-Antitoxin
-2219661..2219761+101NuclAT_2-Antitoxin
-2219661..2219761+101NuclAT_2-Antitoxin
QX56_RS109802220095..2220706-612WP_009967516.1lipoprotein-
QX56_RS109852220821..2221147-327WP_009967517.1helix-turn-helix domain-containing protein-
QX56_RS109902222100..2222294+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2151386..2286168134782


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin SpoIISA, type II toxin-antitoxin system

(9-243)


Sequences

Toxin        


Download         Length: 59 a.a.        Molecular weight: 6882.45 Da        Isoelectric Point: 12.8833

>T50311 WP_009967515.1 NZ_CP010053:c2219720-2219544 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T50311 NZ_CP010053:c2219720-2219544 [Bacillus subtilis]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA

Antitoxin


Download         Length: 101 bp

>AT50311 NZ_CP010053:2219661-2219761 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBO31941

Antitoxin

Download structure file

References