Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrG/- |
Location | 2192552..2192769 | Replicon | chromosome |
Accession | NZ_CP007800 | ||
Organism | Bacillus subtilis subsp. subtilis str. JH642 substr. AG174 strain JH642 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | O31941 |
Locus tag | BSUA_RS11470 | Protein ID | WP_009967515.1 |
Coordinates | 2192552..2192728 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 2192669..2192769 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BSUA_RS11445 | 2187740..2187967 | - | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
BSUA_RS11450 | 2188228..2189544 | - | 1317 | WP_004399369.1 | hypothetical protein | - |
BSUA_RS11455 | 2189901..2190407 | - | 507 | WP_004399486.1 | hypothetical protein | - |
BSUA_RS11460 | 2190735..2191967 | - | 1233 | WP_004399445.1 | hypothetical protein | - |
BSUA_RS11465 | 2192049..2192237 | - | 189 | WP_004399547.1 | hypothetical protein | - |
BSUA_RS22365 | 2192282..2192533 | - | 252 | WP_010886546.1 | hypothetical protein | - |
BSUA_RS11470 | 2192552..2192728 | - | 177 | WP_009967515.1 | hypothetical protein | Toxin |
- | 2192669..2192769 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2192669..2192769 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2192669..2192769 | + | 101 | NuclAT_2 | - | Antitoxin |
- | 2192669..2192769 | + | 101 | NuclAT_2 | - | Antitoxin |
BSUA_RS11475 | 2193103..2193714 | - | 612 | WP_009967516.1 | lipoprotein | - |
BSUA_RS11480 | 2193829..2194155 | - | 327 | WP_009967517.1 | helix-turn-helix domain-containing protein | - |
BSUA_RS11485 | 2195108..2195302 | + | 195 | WP_004399291.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2124394..2259176 | 134782 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6882.45 Da Isoelectric Point: 12.8833
>T47069 WP_009967515.1 NZ_CP007800:c2192728-2192552 [Bacillus subtilis subsp. subtilis str. JH642 substr. AG174]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T47069 NZ_CP007800:c2192728-2192552 [Bacillus subtilis subsp. subtilis str. JH642 substr. AG174]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
Antitoxin
Download Length: 101 bp
>AT47069 NZ_CP007800:2192669-2192769 [Bacillus subtilis subsp. subtilis str. JH642 substr. AG174]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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