Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-SR6/- |
Location | 2191292..2191621 | Replicon | chromosome |
Accession | NZ_AP024628 | ||
Organism | Bacillus subtilis strain BEST3145 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | C0H439 |
Locus tag | K6K00_RS11175 | Protein ID | WP_010886546.1 |
Coordinates | 2191292..2191543 (-) | Length | 84 a.a. |
Antitoxin (RNA)
Gene name | SR6 | ||
Locus tag | - | ||
Coordinates | 2191521..2191621 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K6K00_RS11150 | 2186750..2186977 | - | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
K6K00_RS11155 | 2187238..2188554 | - | 1317 | WP_004399369.1 | hypothetical protein | - |
K6K00_RS11160 | 2188911..2189417 | - | 507 | WP_004399486.1 | hypothetical protein | - |
K6K00_RS11165 | 2189745..2190977 | - | 1233 | WP_004399445.1 | hypothetical protein | - |
K6K00_RS11170 | 2191059..2191247 | - | 189 | WP_004399547.1 | hypothetical protein | - |
K6K00_RS11175 | 2191292..2191543 | - | 252 | WP_010886546.1 | hypothetical protein | Toxin |
- | 2191521..2191621 | + | 101 | - | - | Antitoxin |
K6K00_RS11180 | 2191562..2191738 | - | 177 | WP_009967515.1 | hypothetical protein | - |
- | 2191679..2191779 | + | 101 | NuclAT_2 | - | - |
- | 2191679..2191779 | + | 101 | NuclAT_2 | - | - |
- | 2191679..2191779 | + | 101 | NuclAT_2 | - | - |
- | 2191679..2191779 | + | 101 | NuclAT_2 | - | - |
K6K00_RS11185 | 2192113..2192724 | - | 612 | WP_009967516.1 | lipoprotein | - |
K6K00_RS11190 | 2192839..2193165 | - | 327 | WP_009967517.1 | helix-turn-helix transcriptional regulator | - |
K6K00_RS11195 | 2194118..2194312 | + | 195 | WP_004399291.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2123406..2258186 | 134780 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 84 a.a. Molecular weight: 9956.96 Da Isoelectric Point: 9.7930
>T39127 WP_010886546.1 NZ_AP024628:c2191543-2191292 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH
Download Length: 252 bp
>T39127 NZ_AP024628:c2191543-2191292 [Bacillus subtilis]
ATGAACTTCTCCTTTAGTTCCTACCCATATTATAACATGATCAAGCACATTGCAAACATGAAACGATTCTCATTATGGTT
TACCCATATCACATTCATTGGCTTATTCTTAATGTTTCAACTCATCAAAGATTACTTCAGCAGCGAAGGACAGGCGCTAA
TCAACACAATTTTTGTTGTCACATGTATCATTGCCATATTGTTATGGATCATCTATTGTGTATTCCTTAAACTAAGAAAC
AAGTCACACTAA
ATGAACTTCTCCTTTAGTTCCTACCCATATTATAACATGATCAAGCACATTGCAAACATGAAACGATTCTCATTATGGTT
TACCCATATCACATTCATTGGCTTATTCTTAATGTTTCAACTCATCAAAGATTACTTCAGCAGCGAAGGACAGGCGCTAA
TCAACACAATTTTTGTTGTCACATGTATCATTGCCATATTGTTATGGATCATCTATTGTGTATTCCTTAAACTAAGAAAC
AAGTCACACTAA
Antitoxin
Download Length: 101 bp
>AT39127 NZ_AP024628:2191521-2191621 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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