Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrH/- |
Location | 2245809..2246099 | Replicon | chromosome |
Accession | NZ_AP024627 | ||
Organism | Bacillus subtilis strain BEST3136 |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | K6J86_RS11515 | Protein ID | WP_009967548.1 |
Coordinates | 2245809..2245925 (+) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrH | ||
Locus tag | - | ||
Coordinates | 2245920..2246099 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K6J86_RS11480 (2241736) | 2241736..2241906 | - | 171 | WP_009967544.1 | bacteriocin sublancin-168 | - |
K6J86_RS11485 (2242203) | 2242203..2242520 | - | 318 | WP_009967545.1 | sublancin immunity protein SunI | - |
K6J86_RS11490 (2242622) | 2242622..2243872 | - | 1251 | WP_004398504.1 | UV-damage repair protein uvrX | - |
K6J86_RS11495 (2243865) | 2243865..2244197 | - | 333 | WP_004398710.1 | YolD-like family protein | - |
K6J86_RS11500 (2244371) | 2244371..2244706 | + | 336 | WP_004399073.1 | hypothetical protein | - |
K6J86_RS11505 (2244749) | 2244749..2245105 | - | 357 | WP_004398595.1 | hypothetical protein | - |
K6J86_RS11510 (2245111) | 2245111..2245578 | - | 468 | WP_003246138.1 | YolA family protein | - |
K6J86_RS11515 (2245809) | 2245809..2245925 | + | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
- (2245920) | 2245920..2246099 | - | 180 | NuclAT_1 | - | Antitoxin |
- (2245920) | 2245920..2246099 | - | 180 | NuclAT_1 | - | Antitoxin |
- (2245920) | 2245920..2246099 | - | 180 | NuclAT_1 | - | Antitoxin |
- (2245920) | 2245920..2246099 | - | 180 | NuclAT_1 | - | Antitoxin |
K6J86_RS11520 (2246204) | 2246204..2246737 | - | 534 | WP_004399156.1 | GNAT family protein | - |
K6J86_RS11525 (2246773) | 2246773..2247351 | - | 579 | WP_004399123.1 | SMI1/KNR4 family protein | - |
K6J86_RS11530 (2247415) | 2247415..2247912 | - | 498 | WP_003246188.1 | SMI1/KNR4 family protein | - |
K6J86_RS11535 (2247921) | 2247921..2249636 | - | 1716 | WP_004398855.1 | ribonuclease YeeF family protein | - |
K6J86_RS11540 (2249736) | 2249736..2250293 | - | 558 | WP_003246042.1 | SMI1/KNR4 family protein | - |
K6J86_RS11545 (2250428) | 2250428..2250562 | + | 135 | WP_234047931.1 | transposase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2123843..2258623 | 134780 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T39114 WP_009967548.1 NZ_AP024627:2245809-2245925 [Bacillus subtilis]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
>T39114 NZ_AP024627:2245809-2245925 [Bacillus subtilis]
ATGACTGTTTACGAATCATTAATGATAATGATCAATTTTGGCGGATTGATATTAAATACCGTCTTGTTGATCTTCAATAT
AATGATGATTGTAACGTCAAGCCAAAAGAAAAAATAG
ATGACTGTTTACGAATCATTAATGATAATGATCAATTTTGGCGGATTGATATTAAATACCGTCTTGTTGATCTTCAATAT
AATGATGATTGTAACGTCAAGCCAAAAGAAAAAATAG
Antitoxin
Download Length: 180 bp
>AT39114 NZ_AP024627:c2246099-2245920 [Bacillus subtilis]
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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