Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-SR6/- |
Location | 2191729..2192058 | Replicon | chromosome |
Accession | NZ_AP024627 | ||
Organism | Bacillus subtilis strain BEST3136 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | C0H439 |
Locus tag | K6J86_RS11215 | Protein ID | WP_010886546.1 |
Coordinates | 2191729..2191980 (-) | Length | 84 a.a. |
Antitoxin (RNA)
Gene name | SR6 | ||
Locus tag | - | ||
Coordinates | 2191958..2192058 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K6J86_RS11190 | 2187187..2187414 | - | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
K6J86_RS11195 | 2187675..2188991 | - | 1317 | WP_004399369.1 | hypothetical protein | - |
K6J86_RS11200 | 2189348..2189854 | - | 507 | WP_004399486.1 | hypothetical protein | - |
K6J86_RS11205 | 2190182..2191414 | - | 1233 | WP_004399445.1 | hypothetical protein | - |
K6J86_RS11210 | 2191496..2191684 | - | 189 | WP_004399547.1 | hypothetical protein | - |
K6J86_RS11215 | 2191729..2191980 | - | 252 | WP_010886546.1 | hypothetical protein | Toxin |
- | 2191958..2192058 | + | 101 | - | - | Antitoxin |
K6J86_RS11220 | 2191999..2192175 | - | 177 | WP_009967515.1 | hypothetical protein | - |
- | 2192116..2192216 | + | 101 | NuclAT_2 | - | - |
- | 2192116..2192216 | + | 101 | NuclAT_2 | - | - |
- | 2192116..2192216 | + | 101 | NuclAT_2 | - | - |
- | 2192116..2192216 | + | 101 | NuclAT_2 | - | - |
K6J86_RS11225 | 2192550..2193161 | - | 612 | WP_009967516.1 | lipoprotein | - |
K6J86_RS11230 | 2193276..2193602 | - | 327 | WP_009967517.1 | helix-turn-helix transcriptional regulator | - |
K6J86_RS11235 | 2194555..2194749 | + | 195 | WP_004399291.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2123843..2258623 | 134780 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 84 a.a. Molecular weight: 9956.96 Da Isoelectric Point: 9.7930
>T39104 WP_010886546.1 NZ_AP024627:c2191980-2191729 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH
Download Length: 252 bp
>T39104 NZ_AP024627:c2191980-2191729 [Bacillus subtilis]
ATGAACTTCTCCTTTAGTTCCTACCCATATTATAACATGATCAAGCACATTGCAAACATGAAACGATTCTCATTATGGTT
TACCCATATCACATTCATTGGCTTATTCTTAATGTTTCAACTCATCAAAGATTACTTCAGCAGCGAAGGACAGGCGCTAA
TCAACACAATTTTTGTTGTCACATGTATCATTGCCATATTGTTATGGATCATCTATTGTGTATTCCTTAAACTAAGAAAC
AAGTCACACTAA
ATGAACTTCTCCTTTAGTTCCTACCCATATTATAACATGATCAAGCACATTGCAAACATGAAACGATTCTCATTATGGTT
TACCCATATCACATTCATTGGCTTATTCTTAATGTTTCAACTCATCAAAGATTACTTCAGCAGCGAAGGACAGGCGCTAA
TCAACACAATTTTTGTTGTCACATGTATCATTGCCATATTGTTATGGATCATCTATTGTGTATTCCTTAAACTAAGAAAC
AAGTCACACTAA
Antitoxin
Download Length: 101 bp
>AT39104 NZ_AP024627:2191958-2192058 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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