Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrG/- |
Location | 2185618..2185835 | Replicon | chromosome |
Accession | NZ_AP024626 | ||
Organism | Bacillus subtilis strain BEST3125 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | O31941 |
Locus tag | K6K02_RS11195 | Protein ID | WP_009967515.1 |
Coordinates | 2185618..2185794 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 2185735..2185835 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K6K02_RS11165 (2180806) | 2180806..2181033 | - | 228 | WP_004399298.1 | helix-turn-helix transcriptional regulator | - |
K6K02_RS11170 (2181294) | 2181294..2182610 | - | 1317 | WP_004399369.1 | hypothetical protein | - |
K6K02_RS11175 (2182967) | 2182967..2183473 | - | 507 | WP_004399486.1 | hypothetical protein | - |
K6K02_RS11180 (2183801) | 2183801..2185033 | - | 1233 | WP_004399445.1 | hypothetical protein | - |
K6K02_RS11185 (2185115) | 2185115..2185303 | - | 189 | WP_004399547.1 | hypothetical protein | - |
K6K02_RS11190 (2185348) | 2185348..2185599 | - | 252 | WP_010886546.1 | hypothetical protein | - |
K6K02_RS11195 (2185618) | 2185618..2185794 | - | 177 | WP_009967515.1 | hypothetical protein | Toxin |
- (2185735) | 2185735..2185835 | + | 101 | NuclAT_2 | - | Antitoxin |
- (2185735) | 2185735..2185835 | + | 101 | NuclAT_2 | - | Antitoxin |
- (2185735) | 2185735..2185835 | + | 101 | NuclAT_2 | - | Antitoxin |
- (2185735) | 2185735..2185835 | + | 101 | NuclAT_2 | - | Antitoxin |
K6K02_RS11200 (2186169) | 2186169..2186780 | - | 612 | WP_009967516.1 | lipoprotein | - |
K6K02_RS11205 (2186895) | 2186895..2187221 | - | 327 | WP_009967517.1 | helix-turn-helix transcriptional regulator | - |
K6K02_RS11210 (2188174) | 2188174..2188368 | + | 195 | WP_004399291.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
inside | Prophage | - | - | 2117462..2266489 | 149027 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6882.45 Da Isoelectric Point: 12.8833
>T39087 WP_009967515.1 NZ_AP024626:c2185794-2185618 [Bacillus subtilis]
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKMGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T39087 NZ_AP024626:c2185794-2185618 [Bacillus subtilis]
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
GTGCTTGAGAAAATGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
Antitoxin
Download Length: 101 bp
>AT39087 NZ_AP024626:2185735-2185835 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTACGATACCCATTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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