Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2185329..2185658 Replicon chromosome
Accession NZ_AP024624
Organism Bacillus subtilis strain BEST3106

Toxin (Protein)


Gene name yonT Uniprot ID C0H439
Locus tag K6J91_RS11225 Protein ID WP_010886546.1
Coordinates 2185329..2185580 (-) Length 84 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2185558..2185658 (+)

Genomic Context

------K6J91_RS11245K6J91_RS11200K6J91_RS11205K6J91_RS11210K6J91_RS11215K6J91_RS11220K6J91_RS11225K6J91_RS11230K6J91_RS11235K6J91_RS11240
Location: 2185558..2185658 (101 bp)
Type: Antitoxin
Protein ID: -
Location: 2185716..2185816 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2185716..2185816 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2185716..2185816 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2185716..2185816 (101 bp)
Type: Others
Protein ID: NuclAT_2
Location: 2188155..2188349 (195 bp)
Type: Others
Protein ID: WP_004399291.1
Location: 2180787..2181014 (228 bp)
Type: Others
Protein ID: WP_004399298.1
Location: 2181275..2182591 (1317 bp)
Type: Others
Protein ID: WP_004399369.1
Location: 2182948..2183454 (507 bp)
Type: Others
Protein ID: WP_004399486.1
Location: 2183782..2185014 (1233 bp)
Type: Others
Protein ID: WP_004399445.1
Location: 2185096..2185284 (189 bp)
Type: Others
Protein ID: WP_004399547.1
Location: 2185329..2185580 (252 bp)
Type: Toxin
Protein ID: WP_010886546.1
Location: 2185599..2185775 (177 bp)
Type: Others
Protein ID: WP_009967515.1
Location: 2186150..2186761 (612 bp)
Type: Others
Protein ID: WP_009967516.1
Location: 2186876..2187202 (327 bp)
Type: Others
Protein ID: WP_009967517.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
K6J91_RS112002180787..2181014-228WP_004399298.1helix-turn-helix transcriptional regulator-
K6J91_RS112052181275..2182591-1317WP_004399369.1hypothetical protein-
K6J91_RS112102182948..2183454-507WP_004399486.1hypothetical protein-
K6J91_RS112152183782..2185014-1233WP_004399445.1hypothetical protein-
K6J91_RS112202185096..2185284-189WP_004399547.1hypothetical protein-
K6J91_RS112252185329..2185580-252WP_010886546.1hypothetical proteinToxin
-2185558..2185658+101--Antitoxin
K6J91_RS112302185599..2185775-177WP_009967515.1hypothetical protein-
-2185716..2185816+101NuclAT_2--
-2185716..2185816+101NuclAT_2--
-2185716..2185816+101NuclAT_2--
-2185716..2185816+101NuclAT_2--
K6J91_RS112352186150..2186761-612WP_009967516.1lipoprotein-
K6J91_RS112402186876..2187202-327WP_009967517.1helix-turn-helix transcriptional regulator-
K6J91_RS112452188155..2188349+195WP_004399291.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
insideProphage--2117443..2266470149027


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 84 a.a.        Molecular weight: 9956.96 Da        Isoelectric Point: 9.7930

>T39035 WP_010886546.1 NZ_AP024624:c2185580-2185329 [Bacillus subtilis]
MNFSFSSYPYYNMIKHIANMKRFSLWFTHITFIGLFLMFQLIKDYFSSEGQALINTIFVVTCIIAILLWIIYCVFLKLRN
KSH

Download         Length: 252 bp

>T39035 NZ_AP024624:c2185580-2185329 [Bacillus subtilis]
ATGAACTTCTCCTTTAGTTCCTACCCATATTATAACATGATCAAGCACATTGCAAACATGAAACGATTCTCATTATGGTT
TACCCATATCACATTCATTGGCTTATTCTTAATGTTTCAACTCATCAAAGATTACTTCAGCAGCGAAGGACAGGCGCTAA
TCAACACAATTTTTGTTGTCACATGTATCATTGCCATATTGTTATGGATCATCTATTGTGTATTCCTTAAACTAAGAAAC
AAGTCACACTAA

Antitoxin


Download         Length: 101 bp

>AT39035 NZ_AP024624:2185558-2185658 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBC0H439

Antitoxin

Download structure file

References